Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
A0A1W2PRF3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.67■□□□□ 0.58
A0A1W2PRF3 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.67■□□□□ 0.58
A0A1W2PRF3 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.67■□□□□ 0.58
A0A1W2PRF3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
A0A1W2PRF3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.66■□□□□ 0.58
A0A1W2PRF3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
A0A1W2PRF3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.66■□□□□ 0.58
A0A1W2PRF3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.66■□□□□ 0.58
A0A1W2PRF3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.66■□□□□ 0.58
A0A1W2PRF3 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
A0A1W2PRF3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.66■□□□□ 0.58
A0A1W2PRF3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
A0A1W2PRF3 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
A0A1W2PRF3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
A0A1W2PRF3 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
A0A1W2PRF3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
A0A1W2PRF3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
A0A1W2PRF3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.65■□□□□ 0.58
A0A1W2PRF3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.65■□□□□ 0.58
A0A1W2PRF3 AC131281.2-201ENST00000520478 145 ntBASIC18.65■□□□□ 0.58
A0A1W2PRF3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.65■□□□□ 0.58
A0A1W2PRF3 MIR3621-201ENST00000580529 85 ntBASIC18.65■□□□□ 0.58
A0A1W2PRF3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.65■□□□□ 0.58
A0A1W2PRF3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
A0A1W2PRF3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
A0A1W2PRF3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
A0A1W2PRF3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.65■□□□□ 0.58
A0A1W2PRF3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
A0A1W2PRF3 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
A0A1W2PRF3 LINC01124-201ENST00000409786 2117 ntBASIC18.64■□□□□ 0.57
A0A1W2PRF3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
A0A1W2PRF3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
A0A1W2PRF3 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
A0A1W2PRF3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
A0A1W2PRF3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
A0A1W2PRF3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.63■□□□□ 0.57
A0A1W2PRF3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
A0A1W2PRF3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
A0A1W2PRF3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.63■□□□□ 0.57
A0A1W2PRF3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.63■□□□□ 0.57
A0A1W2PRF3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
A0A1W2PRF3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
A0A1W2PRF3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.63■□□□□ 0.57
A0A1W2PRF3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
A0A1W2PRF3 AC005703.6-201ENST00000623265 1329 ntBASIC18.63■□□□□ 0.57
A0A1W2PRF3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.63■□□□□ 0.57
A0A1W2PRF3 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
A0A1W2PRF3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
A0A1W2PRF3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.62■□□□□ 0.57
A0A1W2PRF3 AL136116.3-201ENST00000402907 1138 ntBASIC18.62■□□□□ 0.57
A0A1W2PRF3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.62■□□□□ 0.57
A0A1W2PRF3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
A0A1W2PRF3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
A0A1W2PRF3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.61■□□□□ 0.57
A0A1W2PRF3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
A0A1W2PRF3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
A0A1W2PRF3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.61■□□□□ 0.57
A0A1W2PRF3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
A0A1W2PRF3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
A0A1W2PRF3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.61■□□□□ 0.57
A0A1W2PRF3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
A0A1W2PRF3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
A0A1W2PRF3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
A0A1W2PRF3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
A0A1W2PRF3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
A0A1W2PRF3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
A0A1W2PRF3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
A0A1W2PRF3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
A0A1W2PRF3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.6■□□□□ 0.57
A0A1W2PRF3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
A0A1W2PRF3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.6■□□□□ 0.57
A0A1W2PRF3 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.6■□□□□ 0.57
A0A1W2PRF3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
A0A1W2PRF3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
A0A1W2PRF3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
A0A1W2PRF3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
A0A1W2PRF3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
A0A1W2PRF3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.59■□□□□ 0.57
A0A1W2PRF3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
A0A1W2PRF3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
A0A1W2PRF3 MIR4466-201ENST00000606121 54 ntBASIC18.59■□□□□ 0.57
A0A1W2PRF3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
A0A1W2PRF3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
A0A1W2PRF3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.59■□□□□ 0.57
A0A1W2PRF3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.59■□□□□ 0.57
A0A1W2PRF3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
A0A1W2PRF3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
A0A1W2PRF3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
A0A1W2PRF3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
A0A1W2PRF3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.58■□□□□ 0.57
A0A1W2PRF3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
A0A1W2PRF3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
A0A1W2PRF3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.58■□□□□ 0.56
A0A1W2PRF3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
A0A1W2PRF3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
A0A1W2PRF3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
A0A1W2PRF3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
A0A1W2PRF3 AL139125.2-201ENST00000623134 1869 ntBASIC18.58■□□□□ 0.56
A0A1W2PRF3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms