Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV27A0A0K0K1C4 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
TRBV27A0A0K0K1C4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
TRBV27A0A0K0K1C4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC16.12■□□□□ 0.17
TRBV27A0A0K0K1C4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV27A0A0K0K1C4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
TRBV27A0A0K0K1C4 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC16.12■□□□□ 0.17
TRBV27A0A0K0K1C4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC16.12■□□□□ 0.17
TRBV27A0A0K0K1C4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC16.12■□□□□ 0.17
TRBV27A0A0K0K1C4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV27A0A0K0K1C4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV27A0A0K0K1C4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
TRBV27A0A0K0K1C4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV27A0A0K0K1C4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV27A0A0K0K1C4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV27A0A0K0K1C4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TRBV27A0A0K0K1C4 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC16.11■□□□□ 0.17
TRBV27A0A0K0K1C4 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC16.11■□□□□ 0.17
TRBV27A0A0K0K1C4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC16.11■□□□□ 0.17
TRBV27A0A0K0K1C4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRBV27A0A0K0K1C4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV27A0A0K0K1C4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV27A0A0K0K1C4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV27A0A0K0K1C4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC16.11■□□□□ 0.17
TRBV27A0A0K0K1C4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV27A0A0K0K1C4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC16.1■□□□□ 0.17
TRBV27A0A0K0K1C4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV27A0A0K0K1C4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV27A0A0K0K1C4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV27A0A0K0K1C4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV27A0A0K0K1C4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC16.1■□□□□ 0.17
TRBV27A0A0K0K1C4 AC022413.1-201ENST00000624602 984 ntBASIC16.1■□□□□ 0.17
TRBV27A0A0K0K1C4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV27A0A0K0K1C4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV27A0A0K0K1C4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV27A0A0K0K1C4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRBV27A0A0K0K1C4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV27A0A0K0K1C4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
TRBV27A0A0K0K1C4 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TRBV27A0A0K0K1C4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV27A0A0K0K1C4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV27A0A0K0K1C4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV27A0A0K0K1C4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.09■□□□□ 0.17
TRBV27A0A0K0K1C4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC16.09■□□□□ 0.17
TRBV27A0A0K0K1C4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRBV27A0A0K0K1C4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV27A0A0K0K1C4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRBV27A0A0K0K1C4 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV27A0A0K0K1C4 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV27A0A0K0K1C4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV27A0A0K0K1C4 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV27A0A0K0K1C4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
TRBV27A0A0K0K1C4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC16.09■□□□□ 0.17
TRBV27A0A0K0K1C4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV27A0A0K0K1C4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC16.09■□□□□ 0.17
TRBV27A0A0K0K1C4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC16.09■□□□□ 0.17
TRBV27A0A0K0K1C4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV27A0A0K0K1C4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV27A0A0K0K1C4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TRBV27A0A0K0K1C4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
TRBV27A0A0K0K1C4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.09■□□□□ 0.17
TRBV27A0A0K0K1C4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV27A0A0K0K1C4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRBV27A0A0K0K1C4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRBV27A0A0K0K1C4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRBV27A0A0K0K1C4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.08■□□□□ 0.16
TRBV27A0A0K0K1C4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TRBV27A0A0K0K1C4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC16.08■□□□□ 0.16
TRBV27A0A0K0K1C4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV27A0A0K0K1C4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
TRBV27A0A0K0K1C4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV27A0A0K0K1C4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV27A0A0K0K1C4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV27A0A0K0K1C4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV27A0A0K0K1C4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV27A0A0K0K1C4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC16.08■□□□□ 0.16
TRBV27A0A0K0K1C4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV27A0A0K0K1C4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV27A0A0K0K1C4 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC16.07■□□□□ 0.16
TRBV27A0A0K0K1C4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC16.07■□□□□ 0.16
TRBV27A0A0K0K1C4 H19-210ENST00000439725 1929 ntTSL 2 BASIC16.07■□□□□ 0.16
TRBV27A0A0K0K1C4 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV27A0A0K0K1C4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV27A0A0K0K1C4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV27A0A0K0K1C4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.07■□□□□ 0.16
TRBV27A0A0K0K1C4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC16.06■□□□□ 0.16
TRBV27A0A0K0K1C4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TRBV27A0A0K0K1C4 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV27A0A0K0K1C4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV27A0A0K0K1C4 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
TRBV27A0A0K0K1C4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV27A0A0K0K1C4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV27A0A0K0K1C4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV27A0A0K0K1C4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV27A0A0K0K1C4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC16.06■□□□□ 0.16
TRBV27A0A0K0K1C4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC16.06■□□□□ 0.16
TRBV27A0A0K0K1C4 AL022069.1-201ENST00000568025 1636 ntBASIC16.06■□□□□ 0.16
TRBV27A0A0K0K1C4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV27A0A0K0K1C4 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC16.06■□□□□ 0.16
TRBV27A0A0K0K1C4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms