Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAV34A0A0B4J273 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC17.52■□□□□ 0.4
TRAV34A0A0B4J273 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV34A0A0B4J273 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV34A0A0B4J273 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV34A0A0B4J273 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.52■□□□□ 0.39
TRAV34A0A0B4J273 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.39
TRAV34A0A0B4J273 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC17.52■□□□□ 0.39
TRAV34A0A0B4J273 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.52■□□□□ 0.39
TRAV34A0A0B4J273 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV34A0A0B4J273 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV34A0A0B4J273 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TRAV34A0A0B4J273 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TRAV34A0A0B4J273 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV34A0A0B4J273 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.51■□□□□ 0.39
TRAV34A0A0B4J273 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV34A0A0B4J273 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAV34A0A0B4J273 AL157400.5-201ENST00000507624 621 ntBASIC17.51■□□□□ 0.39
TRAV34A0A0B4J273 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC17.51■□□□□ 0.39
TRAV34A0A0B4J273 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV34A0A0B4J273 MIR3960-201ENST00000583311 91 ntBASIC17.51■□□□□ 0.39
TRAV34A0A0B4J273 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV34A0A0B4J273 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV34A0A0B4J273 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV34A0A0B4J273 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV34A0A0B4J273 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV34A0A0B4J273 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TRAV34A0A0B4J273 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV34A0A0B4J273 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV34A0A0B4J273 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV34A0A0B4J273 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV34A0A0B4J273 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV34A0A0B4J273 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV34A0A0B4J273 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV34A0A0B4J273 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV34A0A0B4J273 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV34A0A0B4J273 C1orf229-201ENST00000623686 2258 ntBASIC17.5■□□□□ 0.39
TRAV34A0A0B4J273 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV34A0A0B4J273 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TRAV34A0A0B4J273 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
TRAV34A0A0B4J273 ANOS2P-203ENST00000472227 1816 ntBASIC17.49■□□□□ 0.39
TRAV34A0A0B4J273 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV34A0A0B4J273 AGPS-202ENST00000409888 815 ntTSL 4 BASIC17.49■□□□□ 0.39
TRAV34A0A0B4J273 CR559946.2-201ENST00000623684 991 ntBASIC17.49■□□□□ 0.39
TRAV34A0A0B4J273 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAV34A0A0B4J273 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TRAV34A0A0B4J273 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV34A0A0B4J273 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV34A0A0B4J273 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV34A0A0B4J273 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV34A0A0B4J273 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TRAV34A0A0B4J273 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TRAV34A0A0B4J273 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.48■□□□□ 0.39
TRAV34A0A0B4J273 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV34A0A0B4J273 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV34A0A0B4J273 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV34A0A0B4J273 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV34A0A0B4J273 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TRAV34A0A0B4J273 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV34A0A0B4J273 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV34A0A0B4J273 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV34A0A0B4J273 ZNRF2P2-203ENST00000454624 420 ntBASIC17.48■□□□□ 0.39
TRAV34A0A0B4J273 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV34A0A0B4J273 MOB2-207ENST00000614710 705 ntTSL 5 BASIC17.48■□□□□ 0.39
TRAV34A0A0B4J273 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV34A0A0B4J273 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV34A0A0B4J273 FOXO3B-201ENST00000395675 1928 ntBASIC17.48■□□□□ 0.39
TRAV34A0A0B4J273 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TRAV34A0A0B4J273 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV34A0A0B4J273 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV34A0A0B4J273 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV34A0A0B4J273 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV34A0A0B4J273 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV34A0A0B4J273 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TRAV34A0A0B4J273 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV34A0A0B4J273 RPS2P35-201ENST00000443417 897 ntBASIC17.47■□□□□ 0.39
TRAV34A0A0B4J273 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
TRAV34A0A0B4J273 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV34A0A0B4J273 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV34A0A0B4J273 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV34A0A0B4J273 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV34A0A0B4J273 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV34A0A0B4J273 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV34A0A0B4J273 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV34A0A0B4J273 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRAV34A0A0B4J273 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TRAV34A0A0B4J273 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV34A0A0B4J273 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAV34A0A0B4J273 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.38
TRAV34A0A0B4J273 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.46■□□□□ 0.38
TRAV34A0A0B4J273 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TRAV34A0A0B4J273 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
TRAV34A0A0B4J273 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TRAV34A0A0B4J273 SMPD5-203ENST00000639008 1464 ntBASIC17.45■□□□□ 0.38
TRAV34A0A0B4J273 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV34A0A0B4J273 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV34A0A0B4J273 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
TRAV34A0A0B4J273 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV34A0A0B4J273 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC17.45■□□□□ 0.38
TRAV34A0A0B4J273 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms