Protein–RNA interactions for Protein: A0A0B4J272

TRAV24, T-cell receptor alpha variable 24 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV24A0A0B4J272 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TRAV24A0A0B4J272 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TRAV24A0A0B4J272 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.13■□□□□ 0.65
TRAV24A0A0B4J272 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV24A0A0B4J272 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV24A0A0B4J272 AC012676.1-201ENST00000574705 1949 ntBASIC19.13■□□□□ 0.65
TRAV24A0A0B4J272 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV24A0A0B4J272 C9orf163-202ENST00000624034 2573 ntBASIC19.12■□□□□ 0.65
TRAV24A0A0B4J272 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TRAV24A0A0B4J272 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV24A0A0B4J272 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.12■□□□□ 0.65
TRAV24A0A0B4J272 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV24A0A0B4J272 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.12■□□□□ 0.65
TRAV24A0A0B4J272 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV24A0A0B4J272 MIR4508-201ENST00000584178 70 ntBASIC19.12■□□□□ 0.65
TRAV24A0A0B4J272 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.12■□□□□ 0.65
TRAV24A0A0B4J272 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV24A0A0B4J272 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV24A0A0B4J272 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.11■□□□□ 0.65
TRAV24A0A0B4J272 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV24A0A0B4J272 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.11■□□□□ 0.65
TRAV24A0A0B4J272 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV24A0A0B4J272 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV24A0A0B4J272 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV24A0A0B4J272 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV24A0A0B4J272 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV24A0A0B4J272 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
TRAV24A0A0B4J272 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV24A0A0B4J272 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.11■□□□□ 0.65
TRAV24A0A0B4J272 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV24A0A0B4J272 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.11■□□□□ 0.65
TRAV24A0A0B4J272 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV24A0A0B4J272 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TRAV24A0A0B4J272 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.1■□□□□ 0.65
TRAV24A0A0B4J272 AC103834.1-201ENST00000520383 144 ntBASIC19.1■□□□□ 0.65
TRAV24A0A0B4J272 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV24A0A0B4J272 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.1■□□□□ 0.65
TRAV24A0A0B4J272 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.1■□□□□ 0.65
TRAV24A0A0B4J272 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
TRAV24A0A0B4J272 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV24A0A0B4J272 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TRAV24A0A0B4J272 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV24A0A0B4J272 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV24A0A0B4J272 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV24A0A0B4J272 AC092068.2-201ENST00000590491 1708 ntBASIC19.09■□□□□ 0.65
TRAV24A0A0B4J272 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV24A0A0B4J272 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.09■□□□□ 0.65
TRAV24A0A0B4J272 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.09■□□□□ 0.65
TRAV24A0A0B4J272 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV24A0A0B4J272 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.09■□□□□ 0.65
TRAV24A0A0B4J272 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV24A0A0B4J272 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV24A0A0B4J272 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV24A0A0B4J272 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV24A0A0B4J272 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV24A0A0B4J272 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV24A0A0B4J272 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV24A0A0B4J272 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
TRAV24A0A0B4J272 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV24A0A0B4J272 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.09■□□□□ 0.65
TRAV24A0A0B4J272 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV24A0A0B4J272 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
TRAV24A0A0B4J272 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV24A0A0B4J272 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
TRAV24A0A0B4J272 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.08■□□□□ 0.64
TRAV24A0A0B4J272 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.08■□□□□ 0.64
TRAV24A0A0B4J272 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
TRAV24A0A0B4J272 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.07■□□□□ 0.64
TRAV24A0A0B4J272 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV24A0A0B4J272 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TRAV24A0A0B4J272 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV24A0A0B4J272 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV24A0A0B4J272 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.07■□□□□ 0.64
TRAV24A0A0B4J272 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV24A0A0B4J272 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV24A0A0B4J272 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.07■□□□□ 0.64
TRAV24A0A0B4J272 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.07■□□□□ 0.64
TRAV24A0A0B4J272 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV24A0A0B4J272 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV24A0A0B4J272 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV24A0A0B4J272 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV24A0A0B4J272 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV24A0A0B4J272 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAV24A0A0B4J272 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TRAV24A0A0B4J272 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV24A0A0B4J272 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV24A0A0B4J272 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV24A0A0B4J272 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.06■□□□□ 0.64
TRAV24A0A0B4J272 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV24A0A0B4J272 KRT8P33-201ENST00000508125 1423 ntBASIC19.06■□□□□ 0.64
TRAV24A0A0B4J272 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.06■□□□□ 0.64
TRAV24A0A0B4J272 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAV24A0A0B4J272 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.05■□□□□ 0.64
TRAV24A0A0B4J272 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAV24A0A0B4J272 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV24A0A0B4J272 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAV24A0A0B4J272 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV24A0A0B4J272 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV24A0A0B4J272 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV24A0A0B4J272 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms