Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.26■□□□□ 0.35
TRAV8-2A0A0B4J237 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC17.26■□□□□ 0.35
TRAV8-2A0A0B4J237 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRAV8-2A0A0B4J237 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TRAV8-2A0A0B4J237 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV8-2A0A0B4J237 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV8-2A0A0B4J237 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TRAV8-2A0A0B4J237 AC131274.2-201ENST00000580697 1507 ntBASIC17.26■□□□□ 0.35
TRAV8-2A0A0B4J237 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV8-2A0A0B4J237 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAV8-2A0A0B4J237 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV8-2A0A0B4J237 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
TRAV8-2A0A0B4J237 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC17.25■□□□□ 0.35
TRAV8-2A0A0B4J237 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV8-2A0A0B4J237 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TRAV8-2A0A0B4J237 ATP5G2P3-201ENST00000429083 425 ntBASIC17.25■□□□□ 0.35
TRAV8-2A0A0B4J237 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.25■□□□□ 0.35
TRAV8-2A0A0B4J237 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC17.25■□□□□ 0.35
TRAV8-2A0A0B4J237 GAK-223ENST00000628912 497 ntTSL 5 BASIC17.25■□□□□ 0.35
TRAV8-2A0A0B4J237 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TRAV8-2A0A0B4J237 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV8-2A0A0B4J237 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.24■□□□□ 0.35
TRAV8-2A0A0B4J237 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC17.24■□□□□ 0.35
TRAV8-2A0A0B4J237 IDNK-201ENST00000376417 511 ntTSL 5 BASIC17.24■□□□□ 0.35
TRAV8-2A0A0B4J237 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV8-2A0A0B4J237 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV8-2A0A0B4J237 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV8-2A0A0B4J237 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV8-2A0A0B4J237 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV8-2A0A0B4J237 ANOS2P-203ENST00000472227 1816 ntBASIC17.24■□□□□ 0.35
TRAV8-2A0A0B4J237 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAV8-2A0A0B4J237 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV8-2A0A0B4J237 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC17.23■□□□□ 0.35
TRAV8-2A0A0B4J237 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TRAV8-2A0A0B4J237 PVT1_1.1-201ENST00000615125 194 ntBASIC17.23■□□□□ 0.35
TRAV8-2A0A0B4J237 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV8-2A0A0B4J237 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV8-2A0A0B4J237 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.23■□□□□ 0.35
TRAV8-2A0A0B4J237 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV8-2A0A0B4J237 C9orf163-202ENST00000624034 2573 ntBASIC17.23■□□□□ 0.35
TRAV8-2A0A0B4J237 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV8-2A0A0B4J237 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV8-2A0A0B4J237 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV8-2A0A0B4J237 AC120024.1-201ENST00000562672 995 ntBASIC17.22■□□□□ 0.35
TRAV8-2A0A0B4J237 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC17.22■□□□□ 0.35
TRAV8-2A0A0B4J237 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV8-2A0A0B4J237 BHLHE23-202ENST00000612929 1109 ntBASIC17.22■□□□□ 0.35
TRAV8-2A0A0B4J237 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV8-2A0A0B4J237 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TRAV8-2A0A0B4J237 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV8-2A0A0B4J237 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAV8-2A0A0B4J237 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV8-2A0A0B4J237 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV8-2A0A0B4J237 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV8-2A0A0B4J237 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TRAV8-2A0A0B4J237 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV8-2A0A0B4J237 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV8-2A0A0B4J237 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV8-2A0A0B4J237 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TRAV8-2A0A0B4J237 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC17.21■□□□□ 0.35
TRAV8-2A0A0B4J237 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAV8-2A0A0B4J237 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV8-2A0A0B4J237 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
TRAV8-2A0A0B4J237 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV8-2A0A0B4J237 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV8-2A0A0B4J237 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TRAV8-2A0A0B4J237 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.21■□□□□ 0.35
TRAV8-2A0A0B4J237 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TRAV8-2A0A0B4J237 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TRAV8-2A0A0B4J237 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.2■□□□□ 0.34
TRAV8-2A0A0B4J237 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TRAV8-2A0A0B4J237 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV8-2A0A0B4J237 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV8-2A0A0B4J237 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV8-2A0A0B4J237 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAV8-2A0A0B4J237 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRAV8-2A0A0B4J237 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV8-2A0A0B4J237 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV8-2A0A0B4J237 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV8-2A0A0B4J237 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV8-2A0A0B4J237 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TRAV8-2A0A0B4J237 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV8-2A0A0B4J237 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV8-2A0A0B4J237 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV8-2A0A0B4J237 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV8-2A0A0B4J237 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
TRAV8-2A0A0B4J237 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV8-2A0A0B4J237 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV8-2A0A0B4J237 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV8-2A0A0B4J237 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.19■□□□□ 0.34
TRAV8-2A0A0B4J237 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAV8-2A0A0B4J237 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAV8-2A0A0B4J237 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV8-2A0A0B4J237 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV8-2A0A0B4J237 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.19■□□□□ 0.34
TRAV8-2A0A0B4J237 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TRAV8-2A0A0B4J237 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV8-2A0A0B4J237 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV8-2A0A0B4J237 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.18■□□□□ 0.34
TRAV8-2A0A0B4J237 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms