Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.19■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.18■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 AC004448.1-201ENST00000458332 883 ntBASIC20.18■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.18■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 AC137630.3-201ENST00000607245 391 ntBASIC20.18■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.18■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.18■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.17■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.17■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.17■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 DUSP8P5-201ENST00000422884 1815 ntBASIC20.17■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.17■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.17■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.16■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.16■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.16■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.16■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.16■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.15■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.15■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.15■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.15■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.15■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 C9orf163-202ENST00000624034 2573 ntBASIC20.14■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 ANOS2P-203ENST00000472227 1816 ntBASIC20.14■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.14■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 SNX5-217ENST00000606557 1087 ntBASIC20.14■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.13■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.13■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.12■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.12■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.12■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.12■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.12■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.11■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.11■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.11■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.11■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms