Protein–RNA interactions for Protein: A0A075B6M9

TRBV23OR9-2, T-cell receptor beta variable 23/OR9-2 (pseudogene) (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23OR9-2A0A075B6M9 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.26■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.25■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 MIR638-201ENST00000385237 100 ntBASIC22.25■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 SRD5A1P1-201ENST00000442297 786 ntBASIC22.25■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.25■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.24■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.24■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 UNC93B3-201ENST00000308076 687 ntBASIC22.23■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22.23■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.23■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.22■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.22■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.22■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 PBX2P1-201ENST00000493219 1291 ntBASIC22.22■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.21■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.21■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.2■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.2■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.2■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.2■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.19■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.19■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 AC009102.2-201ENST00000606772 1639 ntBASIC22.19■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.18■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.18■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 ALDH1A3-203ENST00000557963 1670 ntBASIC22.17■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.17■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 AL136162.1-201ENST00000607711 1078 ntBASIC22.17■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 AC005837.3-201ENST00000612163 286 ntBASIC22.17■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.16■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.16■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.16■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRBV23OR9-2A0A075B6M9 AL161729.1-201ENST00000604104 1402 ntBASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms