Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 AC092933.1-201ENST00000393644 945 ntBASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 KLF2P4-201ENST00000451959 1225 ntBASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 MIR1908-201ENST00000410394 80 ntBASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 KRT43P-201ENST00000434019 910 ntBASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX49Q9Y6V7 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX49Q9Y6V7 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
DDX49Q9Y6V7 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DDX49Q9Y6V7 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.78■□□□□ 0.44
DDX49Q9Y6V7 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.78■□□□□ 0.44
DDX49Q9Y6V7 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX49Q9Y6V7 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
DDX49Q9Y6V7 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX49Q9Y6V7 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.78■□□□□ 0.44
DDX49Q9Y6V7 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX49Q9Y6V7 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
DDX49Q9Y6V7 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
DDX49Q9Y6V7 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
DDX49Q9Y6V7 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.78■□□□□ 0.44
DDX49Q9Y6V7 CSF2RBP1-201ENST00000447905 391 ntBASIC17.78■□□□□ 0.44
DDX49Q9Y6V7 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DDX49Q9Y6V7 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DDX49Q9Y6V7 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.78■□□□□ 0.44
DDX49Q9Y6V7 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DDX49Q9Y6V7 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX49Q9Y6V7 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
DDX49Q9Y6V7 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX49Q9Y6V7 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
DDX49Q9Y6V7 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms