Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 AL451000.1-201ENST00000451300 1186 ntBASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 AL160191.2-201ENST00000603975 601 ntBASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 WASH3P-207ENST00000560956 1394 ntBASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTCH2Q9Y6C5 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTCH2Q9Y6C5 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTCH2Q9Y6C5 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
PTCH2Q9Y6C5 BRD7P5-201ENST00000299197 1822 ntBASIC16.33■□□□□ 0.21
PTCH2Q9Y6C5 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTCH2Q9Y6C5 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PTCH2Q9Y6C5 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTCH2Q9Y6C5 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PTCH2Q9Y6C5 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTCH2Q9Y6C5 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTCH2Q9Y6C5 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.33■□□□□ 0.21
PTCH2Q9Y6C5 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.33■□□□□ 0.21
PTCH2Q9Y6C5 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTCH2Q9Y6C5 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTCH2Q9Y6C5 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PTCH2Q9Y6C5 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTCH2Q9Y6C5 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.33■□□□□ 0.2
PTCH2Q9Y6C5 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTCH2Q9Y6C5 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTCH2Q9Y6C5 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTCH2Q9Y6C5 AC106827.1-201ENST00000366454 431 ntBASIC16.33■□□□□ 0.2
PTCH2Q9Y6C5 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC16.33■□□□□ 0.2
PTCH2Q9Y6C5 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PTCH2Q9Y6C5 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.33■□□□□ 0.2
PTCH2Q9Y6C5 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC16.33■□□□□ 0.2
PTCH2Q9Y6C5 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC16.33■□□□□ 0.2
PTCH2Q9Y6C5 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC16.33■□□□□ 0.2
PTCH2Q9Y6C5 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTCH2Q9Y6C5 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC16.33■□□□□ 0.2
PTCH2Q9Y6C5 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTCH2Q9Y6C5 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTCH2Q9Y6C5 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTCH2Q9Y6C5 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
PTCH2Q9Y6C5 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC16.33■□□□□ 0.2
PTCH2Q9Y6C5 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTCH2Q9Y6C5 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTCH2Q9Y6C5 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTCH2Q9Y6C5 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTCH2Q9Y6C5 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTCH2Q9Y6C5 TMBIM7P-203ENST00000641617 1718 ntBASIC16.33■□□□□ 0.2
PTCH2Q9Y6C5 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.33■□□□□ 0.2
PTCH2Q9Y6C5 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTCH2Q9Y6C5 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTCH2Q9Y6C5 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PTCH2Q9Y6C5 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTCH2Q9Y6C5 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTCH2Q9Y6C5 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PTCH2Q9Y6C5 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTCH2Q9Y6C5 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTCH2Q9Y6C5 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC16.32■□□□□ 0.2
PTCH2Q9Y6C5 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms