Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 CR383656.2-201ENST00000548656 2254 ntBASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 ACTBP8-201ENST00000403258 1108 ntBASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 GCOM2-201ENST00000509133 1104 ntBASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 AL356585.2-201ENST00000625078 2396 ntBASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TRAF6Q9Y4K3 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 RN7SKP230-201ENST00000365642 335 ntBASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 ACKR1-201ENST00000368121 1240 ntBASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 AC103988.2-201ENST00000561804 725 ntBASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 AC005252.2-201ENST00000624630 1141 ntBASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TRAF6Q9Y4K3 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms