Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 CLUHP6-201ENST00000580789 941 ntBASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 AP005019.2-201ENST00000615104 511 ntBASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 CU634019.7-201ENST00000624153 1185 ntBASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 FP236241.2-201ENST00000624906 1185 ntBASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 AC026434.2-201ENST00000506094 1078 ntBASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 AP001063.1-201ENST00000568332 529 ntBASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 LRRC59-203ENST00000576448 1531 ntBASIC12.96□□□□□ -0.33
RHBDD3Q9Y3P4 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RHBDD3Q9Y3P4 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.34
RHBDD3Q9Y3P4 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RHBDD3Q9Y3P4 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
RHBDD3Q9Y3P4 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RHBDD3Q9Y3P4 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.96□□□□□ -0.34
RHBDD3Q9Y3P4 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
RHBDD3Q9Y3P4 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
RHBDD3Q9Y3P4 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
RHBDD3Q9Y3P4 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.96□□□□□ -0.34
RHBDD3Q9Y3P4 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
RHBDD3Q9Y3P4 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
RHBDD3Q9Y3P4 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RHBDD3Q9Y3P4 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
RHBDD3Q9Y3P4 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
RHBDD3Q9Y3P4 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.96□□□□□ -0.34
RHBDD3Q9Y3P4 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.96□□□□□ -0.34
RHBDD3Q9Y3P4 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms