Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 AC010327.4-202ENST00000591484 748 ntBASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 FOS-202ENST00000535987 1402 ntTSL 2 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 BTBD7P1-201ENST00000447253 1453 ntBASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 TP73-213ENST00000604479 1623 ntTSL 5 BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 BAD-202ENST00000394531 631 ntTSL 3 BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 WRB-204ENST00000398753 699 ntTSL 3 BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 RPSAP43-201ENST00000402237 625 ntBASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 CNN2P11-201ENST00000429351 262 ntBASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 KLF2P3-201ENST00000451977 1087 ntBASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 VDAC1P7-201ENST00000462417 847 ntBASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 RPL13AP25-201ENST00000484130 612 ntBASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 BAD-207ENST00000544785 525 ntTSL 3 BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 Z92544.3-201ENST00000624747 417 ntBASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms