Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 AL354877.1-201ENST00000424412 413 ntBASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 AC005695.3-201ENST00000614522 232 ntBASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 AC005089.1-201ENST00000619486 2241 ntBASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 AL161772.1-201ENST00000610494 4412 ntBASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 TUBB1P2-201ENST00000422712 1306 ntBASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 TUBB1P1-201ENST00000503144 1300 ntBASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
DTX4Q9Y2E6 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 AC079781.5-202ENST00000641784 3743 ntBASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 CICP20-201ENST00000443330 2801 ntBASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 AL162426.1-201ENST00000624141 743 ntBASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
DTX4Q9Y2E6 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms