Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
DKK4Q9UBT3 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
DKK4Q9UBT3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
DKK4Q9UBT3 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
DKK4Q9UBT3 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC13.43□□□□□ -0.26
DKK4Q9UBT3 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.43□□□□□ -0.26
DKK4Q9UBT3 KRT18P62-201ENST00000446618 1287 ntBASIC13.43□□□□□ -0.26
DKK4Q9UBT3 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC13.43□□□□□ -0.26
DKK4Q9UBT3 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.43□□□□□ -0.26
DKK4Q9UBT3 RN7SL375P-201ENST00000492442 298 ntBASIC13.43□□□□□ -0.26
DKK4Q9UBT3 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC13.43□□□□□ -0.26
DKK4Q9UBT3 CD164-210ENST00000512821 964 ntTSL 2 BASIC13.43□□□□□ -0.26
DKK4Q9UBT3 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC13.43□□□□□ -0.26
DKK4Q9UBT3 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
DKK4Q9UBT3 CTBP2P6-201ENST00000526402 1229 ntBASIC13.43□□□□□ -0.26
DKK4Q9UBT3 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC13.43□□□□□ -0.26
DKK4Q9UBT3 VENTXP3-201ENST00000546480 773 ntBASIC13.43□□□□□ -0.26
DKK4Q9UBT3 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
DKK4Q9UBT3 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
DKK4Q9UBT3 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC13.43□□□□□ -0.26
DKK4Q9UBT3 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC13.43□□□□□ -0.26
DKK4Q9UBT3 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC13.43□□□□□ -0.26
DKK4Q9UBT3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.43□□□□□ -0.26
DKK4Q9UBT3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
DKK4Q9UBT3 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.43□□□□□ -0.26
DKK4Q9UBT3 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
DKK4Q9UBT3 MSANTD2P1-201ENST00000445341 1368 ntBASIC13.43□□□□□ -0.26
DKK4Q9UBT3 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
DKK4Q9UBT3 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
DKK4Q9UBT3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
DKK4Q9UBT3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
DKK4Q9UBT3 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
DKK4Q9UBT3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
DKK4Q9UBT3 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 AC139712.1-201ENST00000378256 1875 ntBASIC13.42□□□□□ -0.26
DKK4Q9UBT3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 AC006987.1-201ENST00000413610 527 ntBASIC13.42□□□□□ -0.26
DKK4Q9UBT3 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 AL080243.1-201ENST00000423293 1060 ntBASIC13.42□□□□□ -0.26
DKK4Q9UBT3 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 EEF1DP5-201ENST00000431410 772 ntBASIC13.42□□□□□ -0.26
DKK4Q9UBT3 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 RN7SL846P-201ENST00000467429 292 ntBASIC13.42□□□□□ -0.26
DKK4Q9UBT3 AC095040.1-201ENST00000513286 675 ntBASIC13.42□□□□□ -0.26
DKK4Q9UBT3 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.42□□□□□ -0.26
DKK4Q9UBT3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.42□□□□□ -0.26
DKK4Q9UBT3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
DKK4Q9UBT3 AL008638.4-201ENST00000624792 1315 ntBASIC13.41□□□□□ -0.26
DKK4Q9UBT3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC13.41□□□□□ -0.26
DKK4Q9UBT3 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
DKK4Q9UBT3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.41□□□□□ -0.26
DKK4Q9UBT3 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.41□□□□□ -0.26
DKK4Q9UBT3 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
DKK4Q9UBT3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
DKK4Q9UBT3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
DKK4Q9UBT3 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC13.41□□□□□ -0.26
DKK4Q9UBT3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
DKK4Q9UBT3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
DKK4Q9UBT3 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DKK4Q9UBT3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
DKK4Q9UBT3 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
DKK4Q9UBT3 AC106827.1-201ENST00000366454 431 ntBASIC13.41□□□□□ -0.26
DKK4Q9UBT3 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms