Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
NCDNQ9UBB6 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NCDNQ9UBB6 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NCDNQ9UBB6 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC14.55□□□□□ -0.08
NCDNQ9UBB6 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NCDNQ9UBB6 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC14.55□□□□□ -0.08
NCDNQ9UBB6 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC14.55□□□□□ -0.08
NCDNQ9UBB6 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
NCDNQ9UBB6 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NCDNQ9UBB6 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC14.55□□□□□ -0.08
NCDNQ9UBB6 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NCDNQ9UBB6 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NCDNQ9UBB6 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC14.55□□□□□ -0.08
NCDNQ9UBB6 AQP7P5-201ENST00000428759 1049 ntBASIC14.55□□□□□ -0.08
NCDNQ9UBB6 AQP7P4-201ENST00000447083 1042 ntBASIC14.55□□□□□ -0.08
NCDNQ9UBB6 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
NCDNQ9UBB6 AQP7P2-201ENST00000453967 1041 ntBASIC14.55□□□□□ -0.08
NCDNQ9UBB6 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC14.55□□□□□ -0.08
NCDNQ9UBB6 RNA5SP417-201ENST00000516459 108 ntBASIC14.55□□□□□ -0.08
NCDNQ9UBB6 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NCDNQ9UBB6 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC14.55□□□□□ -0.08
NCDNQ9UBB6 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NCDNQ9UBB6 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NCDNQ9UBB6 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC14.55□□□□□ -0.08
NCDNQ9UBB6 AC021016.3-201ENST00000608367 477 ntBASIC14.55□□□□□ -0.08
NCDNQ9UBB6 AQP7P3-201ENST00000624547 1041 ntBASIC14.55□□□□□ -0.08
NCDNQ9UBB6 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NCDNQ9UBB6 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NCDNQ9UBB6 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
NCDNQ9UBB6 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NCDNQ9UBB6 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NCDNQ9UBB6 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NCDNQ9UBB6 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.55□□□□□ -0.08
NCDNQ9UBB6 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NCDNQ9UBB6 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
NCDNQ9UBB6 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NCDNQ9UBB6 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NCDNQ9UBB6 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NCDNQ9UBB6 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
NCDNQ9UBB6 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.55□□□□□ -0.08
NCDNQ9UBB6 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NCDNQ9UBB6 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NCDNQ9UBB6 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NCDNQ9UBB6 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NCDNQ9UBB6 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NCDNQ9UBB6 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NCDNQ9UBB6 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
NCDNQ9UBB6 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.54□□□□□ -0.08
NCDNQ9UBB6 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NCDNQ9UBB6 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
NCDNQ9UBB6 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NCDNQ9UBB6 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NCDNQ9UBB6 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NCDNQ9UBB6 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.54□□□□□ -0.08
NCDNQ9UBB6 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NCDNQ9UBB6 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
NCDNQ9UBB6 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NCDNQ9UBB6 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NCDNQ9UBB6 RN7SKP109-201ENST00000410592 316 ntBASIC14.54□□□□□ -0.08
NCDNQ9UBB6 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC14.54□□□□□ -0.08
NCDNQ9UBB6 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.54□□□□□ -0.08
NCDNQ9UBB6 AL157407.1-201ENST00000435784 904 ntBASIC14.54□□□□□ -0.08
NCDNQ9UBB6 PGAM1P12-201ENST00000505622 748 ntBASIC14.54□□□□□ -0.08
NCDNQ9UBB6 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC14.54□□□□□ -0.08
NCDNQ9UBB6 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC14.54□□□□□ -0.08
NCDNQ9UBB6 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.54□□□□□ -0.08
NCDNQ9UBB6 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.54□□□□□ -0.08
NCDNQ9UBB6 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC14.54□□□□□ -0.08
NCDNQ9UBB6 AP005264.6-204ENST00000588436 719 ntBASIC14.54□□□□□ -0.08
NCDNQ9UBB6 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC14.54□□□□□ -0.08
NCDNQ9UBB6 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC14.54□□□□□ -0.08
NCDNQ9UBB6 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
NCDNQ9UBB6 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NCDNQ9UBB6 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.54□□□□□ -0.08
NCDNQ9UBB6 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NCDNQ9UBB6 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
NCDNQ9UBB6 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NCDNQ9UBB6 AC013268.4-201ENST00000637413 2228 ntBASIC14.54□□□□□ -0.08
NCDNQ9UBB6 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
NCDNQ9UBB6 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
NCDNQ9UBB6 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NCDNQ9UBB6 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NCDNQ9UBB6 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NCDNQ9UBB6 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
NCDNQ9UBB6 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NCDNQ9UBB6 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
NCDNQ9UBB6 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NCDNQ9UBB6 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NCDNQ9UBB6 AC023824.1-201ENST00000562945 2975 ntBASIC14.53□□□□□ -0.08
NCDNQ9UBB6 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.53□□□□□ -0.08
NCDNQ9UBB6 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NCDNQ9UBB6 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.53□□□□□ -0.08
NCDNQ9UBB6 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.53□□□□□ -0.08
NCDNQ9UBB6 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.53□□□□□ -0.08
NCDNQ9UBB6 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.53□□□□□ -0.08
NCDNQ9UBB6 NORAD-201ENST00000565493 5339 ntBASIC14.53□□□□□ -0.08
NCDNQ9UBB6 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NCDNQ9UBB6 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
NCDNQ9UBB6 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NCDNQ9UBB6 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 255.1 ms