Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
C12orf4Q9NQ89 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.95□□□□□ -0.34
C12orf4Q9NQ89 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.95□□□□□ -0.34
C12orf4Q9NQ89 YBX1P5-201ENST00000509441 847 ntBASIC12.95□□□□□ -0.34
C12orf4Q9NQ89 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC12.95□□□□□ -0.34
C12orf4Q9NQ89 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC12.95□□□□□ -0.34
C12orf4Q9NQ89 MIR4469-201ENST00000583919 79 ntBASIC12.95□□□□□ -0.34
C12orf4Q9NQ89 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.95□□□□□ -0.34
C12orf4Q9NQ89 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
C12orf4Q9NQ89 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.95□□□□□ -0.34
C12orf4Q9NQ89 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC12.95□□□□□ -0.34
C12orf4Q9NQ89 AC025181.2-201ENST00000606994 802 ntBASIC12.95□□□□□ -0.34
C12orf4Q9NQ89 AL589739.1-201ENST00000607720 493 ntBASIC12.95□□□□□ -0.34
C12orf4Q9NQ89 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC12.95□□□□□ -0.34
C12orf4Q9NQ89 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
C12orf4Q9NQ89 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
C12orf4Q9NQ89 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC12.95□□□□□ -0.34
C12orf4Q9NQ89 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
C12orf4Q9NQ89 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
C12orf4Q9NQ89 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
C12orf4Q9NQ89 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
C12orf4Q9NQ89 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
C12orf4Q9NQ89 AC073957.3-201ENST00000609998 6758 ntBASIC12.95□□□□□ -0.34
C12orf4Q9NQ89 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.95□□□□□ -0.34
C12orf4Q9NQ89 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
C12orf4Q9NQ89 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
C12orf4Q9NQ89 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
C12orf4Q9NQ89 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
C12orf4Q9NQ89 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.95□□□□□ -0.34
C12orf4Q9NQ89 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
C12orf4Q9NQ89 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
C12orf4Q9NQ89 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 AC007787.1-201ENST00000588095 1583 ntBASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 MTHFR-210ENST00000641407 2387 ntBASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 AC011474.4-201ENST00000623523 2076 ntBASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 AL022342.1-201ENST00000400363 863 ntBASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 AC104457.1-201ENST00000401024 814 ntBASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 MIR4453-201ENST00000584019 89 ntBASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 AC025048.3-201ENST00000590609 569 ntBASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 AC005702.4-201ENST00000618393 416 ntBASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 LINC00628-201ENST00000628516 1289 ntBASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 AL033527.5-202ENST00000641632 1098 ntBASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms