Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBX8Q9HC52 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBX8Q9HC52 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CBX8Q9HC52 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBX8Q9HC52 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBX8Q9HC52 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBX8Q9HC52 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.47■□□□□ 0.23
CBX8Q9HC52 AC254562.1-201ENST00000417586 456 ntBASIC16.47■□□□□ 0.23
CBX8Q9HC52 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
CBX8Q9HC52 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CBX8Q9HC52 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.47■□□□□ 0.23
CBX8Q9HC52 CNN2P2-201ENST00000443536 909 ntBASIC16.47■□□□□ 0.23
CBX8Q9HC52 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.47■□□□□ 0.23
CBX8Q9HC52 CNN2P3-201ENST00000450201 906 ntBASIC16.47■□□□□ 0.23
CBX8Q9HC52 AC009477.1-201ENST00000452936 217 ntBASIC16.47■□□□□ 0.23
CBX8Q9HC52 SORD2P-201ENST00000558556 1069 ntBASIC16.47■□□□□ 0.23
CBX8Q9HC52 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.47■□□□□ 0.23
CBX8Q9HC52 RARRES2P5-201ENST00000564013 466 ntBASIC16.47■□□□□ 0.23
CBX8Q9HC52 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.47■□□□□ 0.23
CBX8Q9HC52 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
CBX8Q9HC52 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CBX8Q9HC52 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CBX8Q9HC52 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.47■□□□□ 0.23
CBX8Q9HC52 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.47■□□□□ 0.23
CBX8Q9HC52 AL136317.3-201ENST00000618497 906 ntBASIC16.47■□□□□ 0.23
CBX8Q9HC52 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.47■□□□□ 0.23
CBX8Q9HC52 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CBX8Q9HC52 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBX8Q9HC52 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBX8Q9HC52 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBX8Q9HC52 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBX8Q9HC52 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.47■□□□□ 0.23
CBX8Q9HC52 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBX8Q9HC52 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CBX8Q9HC52 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBX8Q9HC52 MIR497HG-202ENST00000572453 3838 ntBASIC16.47■□□□□ 0.23
CBX8Q9HC52 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBX8Q9HC52 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
CBX8Q9HC52 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBX8Q9HC52 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.47■□□□□ 0.23
CBX8Q9HC52 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CBX8Q9HC52 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CBX8Q9HC52 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.47■□□□□ 0.23
CBX8Q9HC52 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC16.47■□□□□ 0.23
CBX8Q9HC52 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CBX8Q9HC52 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CBX8Q9HC52 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CBX8Q9HC52 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.46■□□□□ 0.23
CBX8Q9HC52 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CBX8Q9HC52 KHSRPP1-201ENST00000427983 1768 ntBASIC16.46■□□□□ 0.23
CBX8Q9HC52 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CBX8Q9HC52 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.46■□□□□ 0.23
CBX8Q9HC52 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CBX8Q9HC52 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CBX8Q9HC52 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CBX8Q9HC52 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
CBX8Q9HC52 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CBX8Q9HC52 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CBX8Q9HC52 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CBX8Q9HC52 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CBX8Q9HC52 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CBX8Q9HC52 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CBX8Q9HC52 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
CBX8Q9HC52 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CBX8Q9HC52 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CBX8Q9HC52 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CBX8Q9HC52 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CBX8Q9HC52 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.46■□□□□ 0.23
CBX8Q9HC52 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.46■□□□□ 0.23
CBX8Q9HC52 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.46■□□□□ 0.23
CBX8Q9HC52 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.46■□□□□ 0.23
CBX8Q9HC52 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CBX8Q9HC52 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.46■□□□□ 0.23
CBX8Q9HC52 KLF2P3-201ENST00000451977 1087 ntBASIC16.46■□□□□ 0.23
CBX8Q9HC52 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.46■□□□□ 0.23
CBX8Q9HC52 RN7SL399P-201ENST00000471648 279 ntBASIC16.46■□□□□ 0.23
CBX8Q9HC52 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.46■□□□□ 0.23
CBX8Q9HC52 GCOM2-201ENST00000509133 1104 ntBASIC16.46■□□□□ 0.23
CBX8Q9HC52 AC097493.3-201ENST00000509725 367 ntBASIC16.46■□□□□ 0.23
CBX8Q9HC52 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.46■□□□□ 0.23
CBX8Q9HC52 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.46■□□□□ 0.23
CBX8Q9HC52 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.46■□□□□ 0.23
CBX8Q9HC52 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.46■□□□□ 0.23
CBX8Q9HC52 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.46■□□□□ 0.23
CBX8Q9HC52 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.46■□□□□ 0.23
CBX8Q9HC52 AP001002.3-201ENST00000623482 206 ntBASIC16.46■□□□□ 0.23
CBX8Q9HC52 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC16.46■□□□□ 0.23
CBX8Q9HC52 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CBX8Q9HC52 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CBX8Q9HC52 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CBX8Q9HC52 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CBX8Q9HC52 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.46■□□□□ 0.22
CBX8Q9HC52 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CBX8Q9HC52 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC16.46■□□□□ 0.22
CBX8Q9HC52 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CBX8Q9HC52 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBX8Q9HC52 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.45■□□□□ 0.22
CBX8Q9HC52 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CBX8Q9HC52 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
CBX8Q9HC52 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms