Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 AC087499.6-201ENST00000411576 835 ntBASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 EIF3FP3-201ENST00000434851 1086 ntBASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 KRT18P25-201ENST00000508931 1278 ntBASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 AC093214.1-201ENST00000511688 1107 ntBASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 AC131206.1-201ENST00000538078 1211 ntBASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 AC133539.2-201ENST00000604757 467 ntBASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 AC008761.3-201ENST00000624803 892 ntBASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 TCAM1P-207ENST00000485295 1537 ntBASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 AC011840.2-201ENST00000563063 1520 ntBASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
POLR2J2Q9GZM3 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 MRPL37P1-201ENST00000592451 1337 ntBASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 MYADML-201ENST00000474610 2147 ntBASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms