Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 MIR658-201ENST00000385210 100 ntBASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 AC098850.1-201ENST00000419919 790 ntBASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 ELK1P1-201ENST00000485699 580 ntBASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 AC123567.1-201ENST00000548294 1261 ntBASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 RAB43P1-201ENST00000561790 589 ntBASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.99□□□□□ -0.01
TRIM55Q9BYV6 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 AC018665.1-201ENST00000622927 1362 ntBASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 KRT8P24-201ENST00000560290 1559 ntBASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 HIST3H2BA-201ENST00000436555 524 ntBASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 RPS2P32-201ENST00000439199 892 ntBASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 TTTY23B-201ENST00000442790 549 ntBASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 AC022494.1-201ENST00000466044 728 ntBASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 SLED1-202ENST00000512051 380 ntBASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 MIR6805-201ENST00000615055 62 ntBASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 MIR6069-201ENST00000620069 79 ntBASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 MIR6799-201ENST00000620297 69 ntBASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM55Q9BYV6 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 AC099521.3-201ENST00000624251 2938 ntBASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms