Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 AL354877.1-201ENST00000424412 413 ntBASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 AC021723.1-201ENST00000486306 515 ntBASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 CD74-212ENST00000524315 584 ntTSL 5 BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 AC007663.3-201ENST00000609632 465 ntBASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 AC244093.1-201ENST00000610837 814 ntBASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 AGAP7P-201ENST00000582299 2062 ntBASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 AGAP14-201ENST00000624701 2060 ntBASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 SHC1P1-201ENST00000425230 1745 ntBASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP3Q9BWW4 AC117489.1-201ENST00000625169 3217 ntBASIC12.33□□□□□ -0.43
SSBP3Q9BWW4 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.33□□□□□ -0.43
SSBP3Q9BWW4 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.43
SSBP3Q9BWW4 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.33□□□□□ -0.43
SSBP3Q9BWW4 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
SSBP3Q9BWW4 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
SSBP3Q9BWW4 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSBP3Q9BWW4 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSBP3Q9BWW4 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSBP3Q9BWW4 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSBP3Q9BWW4 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SSBP3Q9BWW4 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSBP3Q9BWW4 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSBP3Q9BWW4 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.33□□□□□ -0.44
SSBP3Q9BWW4 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSBP3Q9BWW4 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSBP3Q9BWW4 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.33□□□□□ -0.44
SSBP3Q9BWW4 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.33□□□□□ -0.44
SSBP3Q9BWW4 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.33□□□□□ -0.44
SSBP3Q9BWW4 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SSBP3Q9BWW4 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSBP3Q9BWW4 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSBP3Q9BWW4 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSBP3Q9BWW4 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SSBP3Q9BWW4 MIR1247-201ENST00000408206 136 ntBASIC12.33□□□□□ -0.44
SSBP3Q9BWW4 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.33□□□□□ -0.44
SSBP3Q9BWW4 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
SSBP3Q9BWW4 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC12.33□□□□□ -0.44
SSBP3Q9BWW4 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SSBP3Q9BWW4 AC004898.1-201ENST00000451057 766 ntBASIC12.33□□□□□ -0.44
SSBP3Q9BWW4 KRT8P13-201ENST00000463294 1010 ntBASIC12.33□□□□□ -0.44
SSBP3Q9BWW4 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SSBP3Q9BWW4 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.33□□□□□ -0.44
SSBP3Q9BWW4 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms