Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 AC131206.1-201ENST00000538078 1211 ntBASIC14.38□□□□□ -0.11
EBF4Q9BQW3 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 BX539320.1-201ENST00000623759 877 ntBASIC14.38□□□□□ -0.11
EBF4Q9BQW3 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 NCLP1-201ENST00000445357 1963 ntBASIC14.38□□□□□ -0.11
EBF4Q9BQW3 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
EBF4Q9BQW3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EBF4Q9BQW3 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
EBF4Q9BQW3 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.37□□□□□ -0.11
EBF4Q9BQW3 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
EBF4Q9BQW3 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EBF4Q9BQW3 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
EBF4Q9BQW3 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
EBF4Q9BQW3 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
EBF4Q9BQW3 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EBF4Q9BQW3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EBF4Q9BQW3 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EBF4Q9BQW3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.37□□□□□ -0.11
EBF4Q9BQW3 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.37□□□□□ -0.11
EBF4Q9BQW3 AL022342.1-201ENST00000400363 863 ntBASIC14.37□□□□□ -0.11
EBF4Q9BQW3 TLE1P1-201ENST00000422965 589 ntBASIC14.37□□□□□ -0.11
EBF4Q9BQW3 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.37□□□□□ -0.11
EBF4Q9BQW3 AC092580.3-201ENST00000430932 139 ntBASIC14.37□□□□□ -0.11
EBF4Q9BQW3 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
EBF4Q9BQW3 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.37□□□□□ -0.11
EBF4Q9BQW3 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.37□□□□□ -0.11
EBF4Q9BQW3 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
EBF4Q9BQW3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.37□□□□□ -0.11
EBF4Q9BQW3 AC022616.1-201ENST00000518688 554 ntBASIC14.37□□□□□ -0.11
EBF4Q9BQW3 Z92544.3-201ENST00000624747 417 ntBASIC14.37□□□□□ -0.11
EBF4Q9BQW3 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EBF4Q9BQW3 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EBF4Q9BQW3 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EBF4Q9BQW3 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC14.37□□□□□ -0.11
EBF4Q9BQW3 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EBF4Q9BQW3 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC14.37□□□□□ -0.11
EBF4Q9BQW3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.37□□□□□ -0.11
EBF4Q9BQW3 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EBF4Q9BQW3 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EBF4Q9BQW3 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.37□□□□□ -0.11
EBF4Q9BQW3 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.37□□□□□ -0.11
EBF4Q9BQW3 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.37□□□□□ -0.11
EBF4Q9BQW3 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.37□□□□□ -0.11
EBF4Q9BQW3 OS9-218ENST00000551035 2246 ntTSL 2 BASIC14.37□□□□□ -0.11
EBF4Q9BQW3 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EBF4Q9BQW3 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
EBF4Q9BQW3 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 AC005014.1-201ENST00000432006 2976 ntBASIC14.36□□□□□ -0.11
EBF4Q9BQW3 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 RNU1-114P-201ENST00000365297 166 ntBASIC14.36□□□□□ -0.11
EBF4Q9BQW3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.36□□□□□ -0.11
EBF4Q9BQW3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.36□□□□□ -0.11
EBF4Q9BQW3 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 EIF3FP3-201ENST00000434851 1086 ntBASIC14.36□□□□□ -0.11
EBF4Q9BQW3 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.36□□□□□ -0.11
EBF4Q9BQW3 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 AC069120.2-201ENST00000524091 540 ntBASIC14.36□□□□□ -0.11
EBF4Q9BQW3 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms