Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 PCDHA3-202ENST00000532566 4594 ntBASIC17.1■□□□□ 0.33
SLF1Q9BQI6 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLF1Q9BQI6 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLF1Q9BQI6 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SLF1Q9BQI6 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SLF1Q9BQI6 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLF1Q9BQI6 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.1■□□□□ 0.33
SLF1Q9BQI6 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SLF1Q9BQI6 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.1■□□□□ 0.33
SLF1Q9BQI6 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.1■□□□□ 0.33
SLF1Q9BQI6 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLF1Q9BQI6 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC17.1■□□□□ 0.33
SLF1Q9BQI6 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.1■□□□□ 0.33
SLF1Q9BQI6 AL157407.1-201ENST00000435784 904 ntBASIC17.1■□□□□ 0.33
SLF1Q9BQI6 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC17.1■□□□□ 0.33
SLF1Q9BQI6 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.1■□□□□ 0.33
SLF1Q9BQI6 SUPT4H1P2-201ENST00000501248 353 ntBASIC17.1■□□□□ 0.33
SLF1Q9BQI6 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLF1Q9BQI6 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.1■□□□□ 0.33
SLF1Q9BQI6 HCG18-245ENST00000602550 559 ntTSL 4 BASIC17.1■□□□□ 0.33
SLF1Q9BQI6 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC17.1■□□□□ 0.33
SLF1Q9BQI6 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SLF1Q9BQI6 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLF1Q9BQI6 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC17.1■□□□□ 0.33
SLF1Q9BQI6 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SLF1Q9BQI6 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLF1Q9BQI6 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SLF1Q9BQI6 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.1■□□□□ 0.33
SLF1Q9BQI6 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLF1Q9BQI6 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC17.1■□□□□ 0.33
SLF1Q9BQI6 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLF1Q9BQI6 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLF1Q9BQI6 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.1■□□□□ 0.33
SLF1Q9BQI6 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLF1Q9BQI6 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 AC136759.1-202ENST00000530858 2194 ntBASIC17.09■□□□□ 0.33
SLF1Q9BQI6 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 AL596276.2-201ENST00000447525 331 ntBASIC17.09■□□□□ 0.33
SLF1Q9BQI6 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 COG4-212ENST00000564653 590 ntTSL 5 BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 NAP1L6-202ENST00000641404 1222 ntBASIC17.09■□□□□ 0.33
SLF1Q9BQI6 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 ACE3P-201ENST00000423435 1973 ntBASIC17.09■□□□□ 0.33
SLF1Q9BQI6 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 AC232323.1-201ENST00000540724 2099 ntBASIC17.09■□□□□ 0.33
SLF1Q9BQI6 AC005089.1-201ENST00000619486 2241 ntBASIC17.09■□□□□ 0.33
SLF1Q9BQI6 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SLF1Q9BQI6 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.33
SLF1Q9BQI6 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLF1Q9BQI6 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLF1Q9BQI6 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLF1Q9BQI6 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.08■□□□□ 0.33
SLF1Q9BQI6 AC007191.1-201ENST00000623179 2995 ntBASIC17.08■□□□□ 0.33
SLF1Q9BQI6 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLF1Q9BQI6 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLF1Q9BQI6 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.08■□□□□ 0.33
SLF1Q9BQI6 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLF1Q9BQI6 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.08■□□□□ 0.33
SLF1Q9BQI6 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.08■□□□□ 0.33
SLF1Q9BQI6 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLF1Q9BQI6 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SLF1Q9BQI6 AL390755.1-201ENST00000623716 2027 ntBASIC17.08■□□□□ 0.33
SLF1Q9BQI6 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLF1Q9BQI6 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SLF1Q9BQI6 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms