Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 AC022616.1-201ENST00000518688 554 ntBASIC13.39□□□□□ -0.27
USB1Q9BQ65 AC109466.1-206ENST00000522686 774 ntTSL 5 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 AL022328.3-201ENST00000607943 679 ntBASIC13.39□□□□□ -0.27
USB1Q9BQ65 AC145423.3-201ENST00000615987 467 ntBASIC13.39□□□□□ -0.27
USB1Q9BQ65 AC109809.1-201ENST00000619665 545 ntBASIC13.39□□□□□ -0.27
USB1Q9BQ65 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
USB1Q9BQ65 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
USB1Q9BQ65 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
USB1Q9BQ65 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
USB1Q9BQ65 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
USB1Q9BQ65 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
USB1Q9BQ65 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
USB1Q9BQ65 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
USB1Q9BQ65 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
USB1Q9BQ65 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
USB1Q9BQ65 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.39□□□□□ -0.27
USB1Q9BQ65 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
USB1Q9BQ65 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
USB1Q9BQ65 AC092809.4-201ENST00000420350 1323 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
USB1Q9BQ65 TUBB1P2-201ENST00000422712 1306 ntBASIC13.39□□□□□ -0.27
USB1Q9BQ65 TUBB1P1-201ENST00000503144 1300 ntBASIC13.39□□□□□ -0.27
USB1Q9BQ65 AC106872.6-201ENST00000514228 1346 ntBASIC13.39□□□□□ -0.27
USB1Q9BQ65 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
USB1Q9BQ65 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
USB1Q9BQ65 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
USB1Q9BQ65 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.38□□□□□ -0.27
USB1Q9BQ65 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
USB1Q9BQ65 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.38□□□□□ -0.27
USB1Q9BQ65 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
USB1Q9BQ65 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
USB1Q9BQ65 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
USB1Q9BQ65 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
USB1Q9BQ65 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
USB1Q9BQ65 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
USB1Q9BQ65 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
USB1Q9BQ65 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
USB1Q9BQ65 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
USB1Q9BQ65 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
USB1Q9BQ65 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.38□□□□□ -0.27
USB1Q9BQ65 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC13.38□□□□□ -0.27
USB1Q9BQ65 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
USB1Q9BQ65 AC006001.1-201ENST00000325130 474 ntBASIC13.38□□□□□ -0.27
USB1Q9BQ65 TTC32-201ENST00000333610 822 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
USB1Q9BQ65 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.38□□□□□ -0.27
USB1Q9BQ65 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
USB1Q9BQ65 TBCA-202ENST00000380377 683 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
USB1Q9BQ65 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
USB1Q9BQ65 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.38□□□□□ -0.27
USB1Q9BQ65 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC13.38□□□□□ -0.27
USB1Q9BQ65 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
USB1Q9BQ65 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.38□□□□□ -0.27
USB1Q9BQ65 AC012513.1-201ENST00000417481 784 ntTSL 2 BASIC13.38□□□□□ -0.27
USB1Q9BQ65 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC13.38□□□□□ -0.27
USB1Q9BQ65 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.38□□□□□ -0.27
USB1Q9BQ65 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
USB1Q9BQ65 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.38□□□□□ -0.27
USB1Q9BQ65 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
USB1Q9BQ65 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.38□□□□□ -0.27
USB1Q9BQ65 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.38□□□□□ -0.27
USB1Q9BQ65 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.38□□□□□ -0.27
USB1Q9BQ65 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.38□□□□□ -0.27
USB1Q9BQ65 MTND3P3-201ENST00000505004 126 ntBASIC13.38□□□□□ -0.27
USB1Q9BQ65 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
USB1Q9BQ65 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
USB1Q9BQ65 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.38□□□□□ -0.27
USB1Q9BQ65 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
USB1Q9BQ65 AC002558.2-201ENST00000572193 673 ntTSL 3 BASIC13.38□□□□□ -0.27
USB1Q9BQ65 AC008686.1-201ENST00000586894 565 ntTSL 5 BASIC13.38□□□□□ -0.27
USB1Q9BQ65 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
USB1Q9BQ65 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.38□□□□□ -0.27
USB1Q9BQ65 STARD13-AS-240ENST00000609608 865 ntTSL 5 BASIC13.38□□□□□ -0.27
USB1Q9BQ65 AC106795.5-201ENST00000623288 454 ntBASIC13.38□□□□□ -0.27
USB1Q9BQ65 AC080188.3-201ENST00000624842 748 ntBASIC13.38□□□□□ -0.27
USB1Q9BQ65 SUGT1P3-205ENST00000633814 572 ntTSL 3 BASIC13.38□□□□□ -0.27
USB1Q9BQ65 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.38□□□□□ -0.27
USB1Q9BQ65 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
USB1Q9BQ65 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
USB1Q9BQ65 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
USB1Q9BQ65 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms