Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SIN3AQ96ST3 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SIN3AQ96ST3 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC21.2■□□□□ 0.98
SIN3AQ96ST3 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SIN3AQ96ST3 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC21.2■□□□□ 0.98
SIN3AQ96ST3 AL161932.2-201ENST00000435436 679 ntBASIC21.2■□□□□ 0.98
SIN3AQ96ST3 APOA2-204ENST00000464492 530 ntTSL 3 BASIC21.2■□□□□ 0.98
SIN3AQ96ST3 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SIN3AQ96ST3 EMC4-209ENST00000559421 497 ntTSL 2 BASIC21.2■□□□□ 0.98
SIN3AQ96ST3 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC21.2■□□□□ 0.98
SIN3AQ96ST3 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC21.2■□□□□ 0.98
SIN3AQ96ST3 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SIN3AQ96ST3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
SIN3AQ96ST3 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SIN3AQ96ST3 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SIN3AQ96ST3 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC21.2■□□□□ 0.98
SIN3AQ96ST3 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC21.2■□□□□ 0.98
SIN3AQ96ST3 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
SIN3AQ96ST3 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SIN3AQ96ST3 MST1P2-201ENST00000457982 2291 ntBASIC21.2■□□□□ 0.98
SIN3AQ96ST3 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC21.2■□□□□ 0.98
SIN3AQ96ST3 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC21.2■□□□□ 0.98
SIN3AQ96ST3 TKT-201ENST00000296289 1931 ntTSL 5 BASIC21.19■□□□□ 0.98
SIN3AQ96ST3 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SIN3AQ96ST3 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SIN3AQ96ST3 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC21.19■□□□□ 0.98
SIN3AQ96ST3 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SIN3AQ96ST3 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SIN3AQ96ST3 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
SIN3AQ96ST3 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SIN3AQ96ST3 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SIN3AQ96ST3 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SIN3AQ96ST3 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SIN3AQ96ST3 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SIN3AQ96ST3 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SIN3AQ96ST3 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SIN3AQ96ST3 NPPA-201ENST00000376476 728 ntTSL 3 BASIC21.19■□□□□ 0.98
SIN3AQ96ST3 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC21.19■□□□□ 0.98
SIN3AQ96ST3 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC21.19■□□□□ 0.98
SIN3AQ96ST3 GAS5-209ENST00000430245 723 ntTSL 3 BASIC21.19■□□□□ 0.98
SIN3AQ96ST3 ST13P19-201ENST00000442505 1124 ntBASIC21.19■□□□□ 0.98
SIN3AQ96ST3 SERPINA13P-202ENST00000478994 924 ntBASIC21.19■□□□□ 0.98
SIN3AQ96ST3 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC21.19■□□□□ 0.98
SIN3AQ96ST3 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC21.19■□□□□ 0.98
SIN3AQ96ST3 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SIN3AQ96ST3 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SIN3AQ96ST3 EID1-202ENST00000560490 584 ntTSL 3 BASIC21.19■□□□□ 0.98
SIN3AQ96ST3 AC004923.1-202ENST00000642106 209 ntBASIC21.19■□□□□ 0.98
SIN3AQ96ST3 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SIN3AQ96ST3 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SIN3AQ96ST3 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SIN3AQ96ST3 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SIN3AQ96ST3 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SIN3AQ96ST3 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC21.19■□□□□ 0.98
SIN3AQ96ST3 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SIN3AQ96ST3 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC21.19■□□□□ 0.98
SIN3AQ96ST3 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SIN3AQ96ST3 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SIN3AQ96ST3 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC21.18■□□□□ 0.98
SIN3AQ96ST3 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SIN3AQ96ST3 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SIN3AQ96ST3 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC21.18■□□□□ 0.98
SIN3AQ96ST3 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SIN3AQ96ST3 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SIN3AQ96ST3 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SIN3AQ96ST3 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SIN3AQ96ST3 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC21.18■□□□□ 0.98
SIN3AQ96ST3 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SIN3AQ96ST3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SIN3AQ96ST3 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SIN3AQ96ST3 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SIN3AQ96ST3 KRT18P36-201ENST00000411618 1276 ntBASIC21.18■□□□□ 0.98
SIN3AQ96ST3 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC21.18■□□□□ 0.98
SIN3AQ96ST3 PTPA-218ENST00000435132 618 ntTSL 2 BASIC21.18■□□□□ 0.98
SIN3AQ96ST3 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SIN3AQ96ST3 AC012441.2-201ENST00000444843 739 ntBASIC21.18■□□□□ 0.98
SIN3AQ96ST3 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC21.18■□□□□ 0.98
SIN3AQ96ST3 RBM8B-201ENST00000555532 525 ntBASIC21.18■□□□□ 0.98
SIN3AQ96ST3 SNORD3B-2-202ENST00000571722 791 ntBASIC21.18■□□□□ 0.98
SIN3AQ96ST3 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC21.18■□□□□ 0.98
SIN3AQ96ST3 AC008805.1-201ENST00000590892 364 ntBASIC21.18■□□□□ 0.98
SIN3AQ96ST3 MIR6074-201ENST00000612054 107 ntBASIC21.18■□□□□ 0.98
SIN3AQ96ST3 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC21.18■□□□□ 0.98
SIN3AQ96ST3 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SIN3AQ96ST3 AL928921.2-201ENST00000641325 2442 ntBASIC21.18■□□□□ 0.98
SIN3AQ96ST3 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC21.18■□□□□ 0.98
SIN3AQ96ST3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
SIN3AQ96ST3 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SIN3AQ96ST3 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SIN3AQ96ST3 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SIN3AQ96ST3 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC21.17■□□□□ 0.98
SIN3AQ96ST3 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIN3AQ96ST3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIN3AQ96ST3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIN3AQ96ST3 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC21.17■□□□□ 0.98
SIN3AQ96ST3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIN3AQ96ST3 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SIN3AQ96ST3 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SIN3AQ96ST3 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SIN3AQ96ST3 PFN1P12-201ENST00000455938 534 ntBASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms