Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 MX1-218ENST00000619682 1980 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 NCR3-202ENST00000376071 541 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 POU5F1P2-201ENST00000521750 823 ntBASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 CCNC-217ENST00000523985 958 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 FRMPD2B-201ENST00000431305 1347 ntBASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 AC026803.1-201ENST00000569130 274 ntBASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 MIR3147-201ENST00000577811 66 ntBASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 POR-201ENST00000394893 2532 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 AC015656.1-201ENST00000624209 3578 ntBASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC85AQ96PX6 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CCDC85AQ96PX6 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC85AQ96PX6 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC85AQ96PX6 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC85AQ96PX6 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms