Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPRD1AQ96P16 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPRD1AQ96P16 AL590440.2-201ENST00000641973 1595 ntBASIC15.18■□□□□ 0.02
RPRD1AQ96P16 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.18■□□□□ 0.02
RPRD1AQ96P16 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPRD1AQ96P16 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPRD1AQ96P16 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPRD1AQ96P16 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPRD1AQ96P16 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPRD1AQ96P16 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RPRD1AQ96P16 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPRD1AQ96P16 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.18■□□□□ 0.02
RPRD1AQ96P16 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPRD1AQ96P16 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RPRD1AQ96P16 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 AC006033.1-201ENST00000440505 426 ntBASIC15.17■□□□□ 0.02
RPRD1AQ96P16 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 RNMTL1P1-201ENST00000454103 560 ntBASIC15.17■□□□□ 0.02
RPRD1AQ96P16 TUBB8P8-201ENST00000458717 1058 ntBASIC15.17■□□□□ 0.02
RPRD1AQ96P16 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 AL023803.2-201ENST00000620080 638 ntBASIC15.17■□□□□ 0.02
RPRD1AQ96P16 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
RPRD1AQ96P16 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPRD1AQ96P16 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RPRD1AQ96P16 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RPRD1AQ96P16 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPRD1AQ96P16 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPRD1AQ96P16 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.16■□□□□ 0.02
RPRD1AQ96P16 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPRD1AQ96P16 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RPRD1AQ96P16 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPRD1AQ96P16 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RPRD1AQ96P16 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.16■□□□□ 0.02
RPRD1AQ96P16 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.16■□□□□ 0.02
RPRD1AQ96P16 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPRD1AQ96P16 KRT8P28-201ENST00000433288 1390 ntBASIC15.16■□□□□ 0.02
RPRD1AQ96P16 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RPRD1AQ96P16 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPRD1AQ96P16 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPRD1AQ96P16 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
RPRD1AQ96P16 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.16■□□□□ 0.02
RPRD1AQ96P16 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPRD1AQ96P16 AC012441.2-201ENST00000444843 739 ntBASIC15.16■□□□□ 0.02
RPRD1AQ96P16 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.16■□□□□ 0.02
RPRD1AQ96P16 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RPRD1AQ96P16 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.16■□□□□ 0.02
RPRD1AQ96P16 AC126915.1-201ENST00000522847 1038 ntBASIC15.16■□□□□ 0.02
RPRD1AQ96P16 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.16■□□□□ 0.02
RPRD1AQ96P16 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
RPRD1AQ96P16 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RPRD1AQ96P16 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RPRD1AQ96P16 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.16■□□□□ 0.02
RPRD1AQ96P16 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.16■□□□□ 0.02
RPRD1AQ96P16 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPRD1AQ96P16 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPRD1AQ96P16 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPRD1AQ96P16 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPRD1AQ96P16 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
RPRD1AQ96P16 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RPRD1AQ96P16 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPRD1AQ96P16 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RPRD1AQ96P16 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
RPRD1AQ96P16 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPRD1AQ96P16 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms