Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 LINC02447-202ENST00000501888 2146 ntBASIC15.84■□□□□ 0.13
LRCH3Q96II8 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC15.84■□□□□ 0.13
LRCH3Q96II8 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC15.84■□□□□ 0.13
LRCH3Q96II8 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.84■□□□□ 0.13
LRCH3Q96II8 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.84■□□□□ 0.13
LRCH3Q96II8 AC068831.5-201ENST00000557387 328 ntBASIC15.84■□□□□ 0.13
LRCH3Q96II8 HCG18-241ENST00000602290 821 ntTSL 2 BASIC15.84■□□□□ 0.13
LRCH3Q96II8 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
LRCH3Q96II8 AC008825.2-201ENST00000603374 718 ntBASIC15.84■□□□□ 0.13
LRCH3Q96II8 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH3Q96II8 AL118522.1-201ENST00000611368 560 ntBASIC15.84■□□□□ 0.13
LRCH3Q96II8 AC092723.2-201ENST00000624955 793 ntBASIC15.84■□□□□ 0.13
LRCH3Q96II8 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH3Q96II8 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH3Q96II8 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
LRCH3Q96II8 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
LRCH3Q96II8 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.84■□□□□ 0.13
LRCH3Q96II8 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH3Q96II8 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRCH3Q96II8 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRCH3Q96II8 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
LRCH3Q96II8 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRCH3Q96II8 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.83■□□□□ 0.13
LRCH3Q96II8 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRCH3Q96II8 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
LRCH3Q96II8 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRCH3Q96II8 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
LRCH3Q96II8 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRCH3Q96II8 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRCH3Q96II8 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
LRCH3Q96II8 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.83■□□□□ 0.12
LRCH3Q96II8 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRCH3Q96II8 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
LRCH3Q96II8 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRCH3Q96II8 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC15.83■□□□□ 0.12
LRCH3Q96II8 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
LRCH3Q96II8 AL512306.1-201ENST00000432698 848 ntBASIC15.83■□□□□ 0.12
LRCH3Q96II8 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC15.83■□□□□ 0.12
LRCH3Q96II8 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC15.83■□□□□ 0.12
LRCH3Q96II8 GNG10P1-201ENST00000452289 199 ntBASIC15.83■□□□□ 0.12
LRCH3Q96II8 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRCH3Q96II8 AC007688.1-201ENST00000475592 759 ntBASIC15.83■□□□□ 0.12
LRCH3Q96II8 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC15.83■□□□□ 0.12
LRCH3Q96II8 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC15.83■□□□□ 0.12
LRCH3Q96II8 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC15.83■□□□□ 0.12
LRCH3Q96II8 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
LRCH3Q96II8 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRCH3Q96II8 AC007250.1-201ENST00000608934 338 ntBASIC15.83■□□□□ 0.12
LRCH3Q96II8 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC15.83■□□□□ 0.12
LRCH3Q96II8 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC15.83■□□□□ 0.12
LRCH3Q96II8 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC15.83■□□□□ 0.12
LRCH3Q96II8 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.83■□□□□ 0.12
LRCH3Q96II8 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRCH3Q96II8 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC15.83■□□□□ 0.12
LRCH3Q96II8 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRCH3Q96II8 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRCH3Q96II8 AL138725.1-201ENST00000407347 1314 ntBASIC15.83■□□□□ 0.12
LRCH3Q96II8 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.83■□□□□ 0.12
LRCH3Q96II8 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRCH3Q96II8 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRCH3Q96II8 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.83■□□□□ 0.12
LRCH3Q96II8 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
LRCH3Q96II8 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.83■□□□□ 0.12
LRCH3Q96II8 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
LRCH3Q96II8 TMBIM7P-202ENST00000641474 1516 ntBASIC15.83■□□□□ 0.12
LRCH3Q96II8 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.83■□□□□ 0.12
LRCH3Q96II8 AL137077.2-201ENST00000635124 1608 ntBASIC15.83■□□□□ 0.12
LRCH3Q96II8 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRCH3Q96II8 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRCH3Q96II8 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRCH3Q96II8 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRCH3Q96II8 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRCH3Q96II8 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRCH3Q96II8 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRCH3Q96II8 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
LRCH3Q96II8 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.82■□□□□ 0.12
LRCH3Q96II8 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
LRCH3Q96II8 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.82■□□□□ 0.12
LRCH3Q96II8 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.82■□□□□ 0.12
LRCH3Q96II8 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRCH3Q96II8 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRCH3Q96II8 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRCH3Q96II8 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRCH3Q96II8 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
LRCH3Q96II8 AL157407.1-201ENST00000435784 904 ntBASIC15.82■□□□□ 0.12
LRCH3Q96II8 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC15.82■□□□□ 0.12
LRCH3Q96II8 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC15.82■□□□□ 0.12
LRCH3Q96II8 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRCH3Q96II8 AC080013.5-201ENST00000607044 679 ntBASIC15.82■□□□□ 0.12
LRCH3Q96II8 AL450487.2-201ENST00000615934 407 ntBASIC15.82■□□□□ 0.12
LRCH3Q96II8 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRCH3Q96II8 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRCH3Q96II8 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRCH3Q96II8 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC15.82■□□□□ 0.12
LRCH3Q96II8 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
LRCH3Q96II8 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
LRCH3Q96II8 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.82■□□□□ 0.12
LRCH3Q96II8 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRCH3Q96II8 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRCH3Q96II8 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms