Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 BAX-205ENST00000391871 687 ntTSL 5 BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 AF274858.1-201ENST00000406288 372 ntBASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 RNLS-203ENST00000437752 525 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 AC006529.1-201ENST00000459978 637 ntBASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 CASP3-205ENST00000517513 964 ntTSL 5 BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 AC140658.4-201ENST00000561990 352 ntBASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 PTPN20CP-201ENST00000614090 920 ntBASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TRIM43Q96BQ3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 AC020658.6-201ENST00000623564 1870 ntBASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 NHP2P1-201ENST00000335274 462 ntBASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 NME6-208ENST00000435684 599 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 AL451000.1-201ENST00000451300 1186 ntBASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 VENTXP3-201ENST00000546480 773 ntBASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 AP000769.1-203ENST00000637245 208 ntBASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM43Q96BQ3 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 GRPEL2P1-201ENST00000453145 339 ntBASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 RN7SL288P-201ENST00000490496 291 ntBASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 KRT18P37-201ENST00000520711 1282 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms