Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 MYCLP2-201ENST00000449268 967 ntBASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 AL512638.1-201ENST00000457493 794 ntBASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 BX088702.1-201ENST00000610784 235 ntBASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC44A1Q8WWI5 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC44A1Q8WWI5 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.77□□□□□ -0.04
SLC44A1Q8WWI5 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.77□□□□□ -0.04
SLC44A1Q8WWI5 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.77□□□□□ -0.04
SLC44A1Q8WWI5 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC44A1Q8WWI5 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC44A1Q8WWI5 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.77□□□□□ -0.04
SLC44A1Q8WWI5 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
SLC44A1Q8WWI5 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.77□□□□□ -0.04
SLC44A1Q8WWI5 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.77□□□□□ -0.04
SLC44A1Q8WWI5 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC44A1Q8WWI5 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC44A1Q8WWI5 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC44A1Q8WWI5 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC44A1Q8WWI5 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.77□□□□□ -0.04
SLC44A1Q8WWI5 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
SLC44A1Q8WWI5 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SLC44A1Q8WWI5 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC44A1Q8WWI5 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SLC44A1Q8WWI5 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC44A1Q8WWI5 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC44A1Q8WWI5 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC44A1Q8WWI5 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.77□□□□□ -0.05
SLC44A1Q8WWI5 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.77□□□□□ -0.05
SLC44A1Q8WWI5 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.77□□□□□ -0.05
SLC44A1Q8WWI5 MESTP3-201ENST00000503460 968 ntBASIC14.77□□□□□ -0.05
SLC44A1Q8WWI5 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.77□□□□□ -0.05
SLC44A1Q8WWI5 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.77□□□□□ -0.05
SLC44A1Q8WWI5 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.77□□□□□ -0.05
SLC44A1Q8WWI5 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.77□□□□□ -0.05
SLC44A1Q8WWI5 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC44A1Q8WWI5 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.77□□□□□ -0.05
SLC44A1Q8WWI5 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.77□□□□□ -0.05
SLC44A1Q8WWI5 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.77□□□□□ -0.05
SLC44A1Q8WWI5 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
SLC44A1Q8WWI5 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SLC44A1Q8WWI5 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC44A1Q8WWI5 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC44A1Q8WWI5 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
SLC44A1Q8WWI5 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SLC44A1Q8WWI5 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC44A1Q8WWI5 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.77□□□□□ -0.05
SLC44A1Q8WWI5 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC44A1Q8WWI5 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC44A1Q8WWI5 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.77□□□□□ -0.05
SLC44A1Q8WWI5 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.77□□□□□ -0.05
SLC44A1Q8WWI5 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC44A1Q8WWI5 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
SLC44A1Q8WWI5 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SLC44A1Q8WWI5 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
SLC44A1Q8WWI5 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.76□□□□□ -0.05
SLC44A1Q8WWI5 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms