Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 NUS1P3-201ENST00000423502 862 ntBASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 AC055876.3-201ENST00000431496 288 ntBASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 AL353779.1-201ENST00000434793 351 ntBASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 RPL13AP25-201ENST00000484130 612 ntBASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 AC026410.3-201ENST00000514280 936 ntBASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 AC135586.1-201ENST00000539323 574 ntBASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 AC138649.4-201ENST00000612222 287 ntBASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 AC022144.1-201ENST00000602255 1580 ntBASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 KRT18P28-201ENST00000453838 1332 ntBASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 KRT8P14-201ENST00000414254 1442 ntBASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
DNAAF1Q8NEP3 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 CLK3P2-201ENST00000427566 1453 ntBASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 AL158070.2-201ENST00000623713 1621 ntBASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 MEP1AP4-201ENST00000423244 1087 ntBASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 FAM86LP-201ENST00000478302 853 ntBASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 AC004890.2-204ENST00000481968 304 ntBASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 DUX4L27-201ENST00000554796 1261 ntBASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 RRP7BP-205ENST00000566851 833 ntBASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms