Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.47□□□□□ -0.25
CLDN22Q8N7P3 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDN22Q8N7P3 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CLDN22Q8N7P3 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.47□□□□□ -0.25
CLDN22Q8N7P3 AC138969.2-201ENST00000532739 9932 ntBASIC13.47□□□□□ -0.25
CLDN22Q8N7P3 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CLDN22Q8N7P3 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.47□□□□□ -0.25
CLDN22Q8N7P3 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDN22Q8N7P3 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDN22Q8N7P3 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDN22Q8N7P3 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDN22Q8N7P3 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDN22Q8N7P3 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CLDN22Q8N7P3 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDN22Q8N7P3 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 AL138725.1-201ENST00000407347 1314 ntBASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 ELK1P1-201ENST00000485699 580 ntBASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 API5-211ENST00000534695 560 ntTSL 5 BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 AC008494.3-201ENST00000606615 944 ntBASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
CLDN22Q8N7P3 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CLDN22Q8N7P3 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CLDN22Q8N7P3 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.46□□□□□ -0.26
CLDN22Q8N7P3 AC012617.1-204ENST00000586340 2305 ntBASIC13.46□□□□□ -0.26
CLDN22Q8N7P3 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLDN22Q8N7P3 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
CLDN22Q8N7P3 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.46□□□□□ -0.26
CLDN22Q8N7P3 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
CLDN22Q8N7P3 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
CLDN22Q8N7P3 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
CLDN22Q8N7P3 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLDN22Q8N7P3 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN22Q8N7P3 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.45□□□□□ -0.26
CLDN22Q8N7P3 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN22Q8N7P3 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN22Q8N7P3 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN22Q8N7P3 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.45□□□□□ -0.26
CLDN22Q8N7P3 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CLDN22Q8N7P3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.45□□□□□ -0.26
CLDN22Q8N7P3 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN22Q8N7P3 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN22Q8N7P3 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN22Q8N7P3 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN22Q8N7P3 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CLDN22Q8N7P3 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN22Q8N7P3 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CLDN22Q8N7P3 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CLDN22Q8N7P3 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN22Q8N7P3 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
CLDN22Q8N7P3 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN22Q8N7P3 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN22Q8N7P3 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
CLDN22Q8N7P3 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms