Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 AC097359.2-201ENST00000604992 2389 ntBASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 EDF1-203ENST00000371649 790 ntTSL 2 BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 KRT43P-201ENST00000434019 910 ntBASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 FTH1P14-201ENST00000482930 551 ntBASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 CDC23-208ENST00000505120 455 ntTSL 3 BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 CR383656.12-201ENST00000549567 513 ntBASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 AC106820.3-201ENST00000561653 397 ntBASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 LARP4-220ENST00000615080 856 ntTSL 5 BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 MYADML-201ENST00000474610 2147 ntBASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC11.69□□□□□ -0.54
TTC9CQ8N5M4 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 AC015656.1-201ENST00000624209 3578 ntBASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 AC020910.5-201ENST00000623668 1865 ntBASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 INE2-201ENST00000630399 1874 ntBASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms