Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 AL355385.1-201ENST00000606123 409 ntBASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 KHSRPP1-201ENST00000427983 1768 ntBASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 AL359881.3-201ENST00000602640 1721 ntBASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC83Q8IWF9 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC83Q8IWF9 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC83Q8IWF9 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC83Q8IWF9 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CCDC83Q8IWF9 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC83Q8IWF9 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC83Q8IWF9 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC83Q8IWF9 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC83Q8IWF9 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC83Q8IWF9 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CCDC83Q8IWF9 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC83Q8IWF9 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC83Q8IWF9 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC83Q8IWF9 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC83Q8IWF9 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC83Q8IWF9 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC83Q8IWF9 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CCDC83Q8IWF9 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CCDC83Q8IWF9 CRB3P1-201ENST00000449338 276 ntBASIC17.32■□□□□ 0.36
CCDC83Q8IWF9 FTLP10-202ENST00000505798 471 ntBASIC17.32■□□□□ 0.36
CCDC83Q8IWF9 GNRHR2-203ENST00000581100 1187 ntBASIC17.32■□□□□ 0.36
CCDC83Q8IWF9 ECM1P1-201ENST00000604092 1279 ntBASIC17.32■□□□□ 0.36
CCDC83Q8IWF9 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC83Q8IWF9 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC83Q8IWF9 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC83Q8IWF9 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CCDC83Q8IWF9 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC83Q8IWF9 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC83Q8IWF9 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC83Q8IWF9 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC83Q8IWF9 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC83Q8IWF9 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC83Q8IWF9 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CCDC83Q8IWF9 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 RN7SL48P-201ENST00000579283 293 ntBASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 MIR6074-201ENST00000612054 107 ntBASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms