Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKL3Q8IVW4 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.15■□□□□ 0.02
CDKL3Q8IVW4 RNA5SP486-201ENST00000515961 83 ntBASIC15.15■□□□□ 0.02
CDKL3Q8IVW4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CDKL3Q8IVW4 SORD2P-201ENST00000558556 1069 ntBASIC15.15■□□□□ 0.02
CDKL3Q8IVW4 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.15■□□□□ 0.02
CDKL3Q8IVW4 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.15■□□□□ 0.02
CDKL3Q8IVW4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
CDKL3Q8IVW4 AC025048.6-201ENST00000634326 1161 ntBASIC15.15■□□□□ 0.02
CDKL3Q8IVW4 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.15■□□□□ 0.02
CDKL3Q8IVW4 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKL3Q8IVW4 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKL3Q8IVW4 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.15■□□□□ 0.02
CDKL3Q8IVW4 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.15■□□□□ 0.02
CDKL3Q8IVW4 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CDKL3Q8IVW4 AC011498.7-201ENST00000624986 2027 ntBASIC15.15■□□□□ 0.02
CDKL3Q8IVW4 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKL3Q8IVW4 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CDKL3Q8IVW4 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKL3Q8IVW4 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.15■□□□□ 0.02
CDKL3Q8IVW4 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CDKL3Q8IVW4 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.15■□□□□ 0.02
CDKL3Q8IVW4 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CDKL3Q8IVW4 AC009093.2-202ENST00000620513 2079 ntBASIC15.15■□□□□ 0.02
CDKL3Q8IVW4 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDKL3Q8IVW4 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 AL590640.2-201ENST00000457038 527 ntBASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 SLC25A47P1-201ENST00000531577 414 ntBASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 OR10B1P-201ENST00000601666 907 ntBASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 MST1P2-201ENST00000457982 2291 ntBASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKL3Q8IVW4 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKL3Q8IVW4 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKL3Q8IVW4 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDKL3Q8IVW4 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.13■□□□□ 0.01
CDKL3Q8IVW4 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKL3Q8IVW4 AC011474.4-201ENST00000623523 2076 ntBASIC15.13■□□□□ 0.01
CDKL3Q8IVW4 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CDKL3Q8IVW4 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CDKL3Q8IVW4 AC138969.2-201ENST00000532739 9932 ntBASIC15.13■□□□□ 0.01
CDKL3Q8IVW4 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKL3Q8IVW4 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CDKL3Q8IVW4 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CDKL3Q8IVW4 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKL3Q8IVW4 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKL3Q8IVW4 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKL3Q8IVW4 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDKL3Q8IVW4 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKL3Q8IVW4 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CDKL3Q8IVW4 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKL3Q8IVW4 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKL3Q8IVW4 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKL3Q8IVW4 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms