Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 AC015688.4-201ENST00000580780 1647 ntBASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NUDCD3Q8IVD9 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 KRT8P35-201ENST00000483942 1338 ntBASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 AC005562.1-201ENST00000583030 3219 ntBASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 RPSAP43-201ENST00000402237 625 ntBASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 AL139094.1-201ENST00000405549 1188 ntBASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 AC254562.1-201ENST00000417586 456 ntBASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 CNN2P11-201ENST00000429351 262 ntBASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 CNN2P2-201ENST00000443536 909 ntBASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 CNN2P3-201ENST00000450201 906 ntBASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 AC125807.1-201ENST00000483097 614 ntBASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 AC026434.2-201ENST00000506094 1078 ntBASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 AL671883.3-201ENST00000603274 991 ntBASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 AC093813.1-201ENST00000605066 256 ntBASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 AL136317.3-201ENST00000618497 906 ntBASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 BX539320.1-201ENST00000623759 877 ntBASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 AC027612.1-201ENST00000445234 2395 ntBASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
NUDCD3Q8IVD9 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NUDCD3Q8IVD9 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
NUDCD3Q8IVD9 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
NUDCD3Q8IVD9 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.68□□□□□ -0.06
NUDCD3Q8IVD9 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.68□□□□□ -0.06
NUDCD3Q8IVD9 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NUDCD3Q8IVD9 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
NUDCD3Q8IVD9 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NUDCD3Q8IVD9 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NUDCD3Q8IVD9 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
NUDCD3Q8IVD9 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
NUDCD3Q8IVD9 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.68□□□□□ -0.06
NUDCD3Q8IVD9 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.68□□□□□ -0.06
NUDCD3Q8IVD9 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NUDCD3Q8IVD9 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.68□□□□□ -0.06
NUDCD3Q8IVD9 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.68□□□□□ -0.06
NUDCD3Q8IVD9 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.68□□□□□ -0.06
NUDCD3Q8IVD9 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
NUDCD3Q8IVD9 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.68□□□□□ -0.06
NUDCD3Q8IVD9 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.68□□□□□ -0.06
NUDCD3Q8IVD9 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.68□□□□□ -0.06
NUDCD3Q8IVD9 TLE1P1-201ENST00000422965 589 ntBASIC14.68□□□□□ -0.06
NUDCD3Q8IVD9 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.68□□□□□ -0.06
NUDCD3Q8IVD9 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.68□□□□□ -0.06
NUDCD3Q8IVD9 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.68□□□□□ -0.06
NUDCD3Q8IVD9 HLA-J-203ENST00000494367 1087 ntBASIC14.68□□□□□ -0.06
NUDCD3Q8IVD9 AC022616.1-201ENST00000518688 554 ntBASIC14.68□□□□□ -0.06
NUDCD3Q8IVD9 AC109322.1-201ENST00000524499 1264 ntBASIC14.68□□□□□ -0.06
NUDCD3Q8IVD9 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.68□□□□□ -0.06
NUDCD3Q8IVD9 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.68□□□□□ -0.06
NUDCD3Q8IVD9 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.68□□□□□ -0.06
NUDCD3Q8IVD9 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.68□□□□□ -0.06
NUDCD3Q8IVD9 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
NUDCD3Q8IVD9 AL049840.4-201ENST00000602422 811 ntBASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms