Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE8Q86YQ8 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC15.39■□□□□ 0.05
CPNE8Q86YQ8 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.39■□□□□ 0.05
CPNE8Q86YQ8 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CPNE8Q86YQ8 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE8Q86YQ8 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE8Q86YQ8 FAM90A12P-201ENST00000519497 2375 ntBASIC15.39■□□□□ 0.05
CPNE8Q86YQ8 FAM90A24P-201ENST00000520792 2369 ntBASIC15.39■□□□□ 0.05
CPNE8Q86YQ8 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE8Q86YQ8 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 TTTY23B-201ENST00000442790 549 ntBASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 RNA5SP486-201ENST00000515961 83 ntBASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 AL358472.3-201ENST00000608147 415 ntBASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE8Q86YQ8 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE8Q86YQ8 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE8Q86YQ8 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE8Q86YQ8 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE8Q86YQ8 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CPNE8Q86YQ8 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE8Q86YQ8 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CPNE8Q86YQ8 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE8Q86YQ8 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE8Q86YQ8 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CPNE8Q86YQ8 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC15.37■□□□□ 0.05
CPNE8Q86YQ8 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE8Q86YQ8 AC098614.1-201ENST00000368528 745 ntBASIC15.37■□□□□ 0.05
CPNE8Q86YQ8 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.37■□□□□ 0.05
CPNE8Q86YQ8 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
CPNE8Q86YQ8 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE8Q86YQ8 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.37■□□□□ 0.05
CPNE8Q86YQ8 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.37■□□□□ 0.05
CPNE8Q86YQ8 FAM8A4P-201ENST00000435433 1213 ntBASIC15.37■□□□□ 0.05
CPNE8Q86YQ8 CROCCP4-201ENST00000457096 498 ntBASIC15.37■□□□□ 0.05
CPNE8Q86YQ8 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.37■□□□□ 0.05
CPNE8Q86YQ8 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE8Q86YQ8 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE8Q86YQ8 KRT90P-201ENST00000549264 1064 ntBASIC15.37■□□□□ 0.05
CPNE8Q86YQ8 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.37■□□□□ 0.05
CPNE8Q86YQ8 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE8Q86YQ8 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.37■□□□□ 0.05
CPNE8Q86YQ8 AC233724.13-201ENST00000598383 410 ntBASIC15.37■□□□□ 0.05
CPNE8Q86YQ8 MIR6074-201ENST00000612054 107 ntBASIC15.37■□□□□ 0.05
CPNE8Q86YQ8 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE8Q86YQ8 AC132938.4-201ENST00000623835 848 ntBASIC15.37■□□□□ 0.05
CPNE8Q86YQ8 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.37■□□□□ 0.05
CPNE8Q86YQ8 AC002472.3-201ENST00000640124 621 ntBASIC15.37■□□□□ 0.05
CPNE8Q86YQ8 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.37■□□□□ 0.05
CPNE8Q86YQ8 CICP17-201ENST00000418553 2377 ntBASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms