Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
LRRTM1Q86UE6 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LRRTM1Q86UE6 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 AC118758.2-201ENST00000614242 2813 ntBASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 AC009477.1-201ENST00000452936 217 ntBASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 RARRES2P5-201ENST00000564013 466 ntBASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 AC140878.1-201ENST00000565277 250 ntBASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 AC009407.1-201ENST00000568958 598 ntBASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 AL603764.1-201ENST00000636452 321 ntBASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRTM1Q86UE6 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 AC072061.1-201ENST00000569710 2234 ntBASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 AC068760.1-201ENST00000493579 1953 ntBASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 RNU1-114P-201ENST00000365297 166 ntBASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 EIF3FP3-201ENST00000434851 1086 ntBASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 AC097493.3-201ENST00000509725 367 ntBASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 DHDH-204ENST00000523250 634 ntTSL 5 BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 SPDYE22P-201ENST00000582158 798 ntBASIC12.82□□□□□ -0.36
LRRTM1Q86UE6 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms