Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SCXQ7RTU7 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
SCXQ7RTU7 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SCXQ7RTU7 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC9.88□□□□□ -0.83
SCXQ7RTU7 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
SCXQ7RTU7 AC134312.5-201ENST00000568031 1313 ntBASIC9.88□□□□□ -0.83
SCXQ7RTU7 AC093525.8-201ENST00000624099 1342 ntBASIC9.88□□□□□ -0.83
SCXQ7RTU7 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
SCXQ7RTU7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SCXQ7RTU7 AC011477.6-201ENST00000604980 1927 ntBASIC9.88□□□□□ -0.83
SCXQ7RTU7 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SCXQ7RTU7 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SCXQ7RTU7 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SCXQ7RTU7 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SCXQ7RTU7 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SCXQ7RTU7 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
SCXQ7RTU7 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC9.88□□□□□ -0.83
SCXQ7RTU7 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SCXQ7RTU7 AC087481.3-201ENST00000602886 1894 ntBASIC9.88□□□□□ -0.83
SCXQ7RTU7 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SCXQ7RTU7 TP73-209ENST00000603362 1668 ntTSL 5 BASIC9.88□□□□□ -0.83
SCXQ7RTU7 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SCXQ7RTU7 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
SCXQ7RTU7 FAM86MP-201ENST00000340703 885 ntBASIC9.88□□□□□ -0.83
SCXQ7RTU7 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SCXQ7RTU7 BAATP1-201ENST00000412284 1225 ntBASIC9.88□□□□□ -0.83
SCXQ7RTU7 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC9.88□□□□□ -0.83
SCXQ7RTU7 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC9.88□□□□□ -0.83
SCXQ7RTU7 AC012441.1-201ENST00000446669 685 ntBASIC9.88□□□□□ -0.83
SCXQ7RTU7 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC9.88□□□□□ -0.83
SCXQ7RTU7 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SCXQ7RTU7 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC9.88□□□□□ -0.83
SCXQ7RTU7 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC9.88□□□□□ -0.83
SCXQ7RTU7 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC9.88□□□□□ -0.83
SCXQ7RTU7 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC9.88□□□□□ -0.83
SCXQ7RTU7 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
SCXQ7RTU7 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC9.88□□□□□ -0.83
SCXQ7RTU7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC9.88□□□□□ -0.83
SCXQ7RTU7 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SCXQ7RTU7 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
SCXQ7RTU7 RN7SL219P-201ENST00000582872 296 ntBASIC9.88□□□□□ -0.83
SCXQ7RTU7 GPX4-206ENST00000588919 803 ntTSL 2 BASIC9.88□□□□□ -0.83
SCXQ7RTU7 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SCXQ7RTU7 ATF5-205ENST00000600336 682 ntTSL 2 BASIC9.88□□□□□ -0.83
SCXQ7RTU7 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC9.88□□□□□ -0.83
SCXQ7RTU7 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC9.88□□□□□ -0.83
SCXQ7RTU7 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SCXQ7RTU7 C1R-201ENST00000535233 2211 ntTSL 2 BASIC9.88□□□□□ -0.83
SCXQ7RTU7 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SCXQ7RTU7 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SCXQ7RTU7 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SCXQ7RTU7 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC9.88□□□□□ -0.83
SCXQ7RTU7 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SCXQ7RTU7 TP73-213ENST00000604479 1623 ntTSL 5 BASIC9.88□□□□□ -0.83
SCXQ7RTU7 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC9.88□□□□□ -0.83
SCXQ7RTU7 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SCXQ7RTU7 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
SCXQ7RTU7 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SCXQ7RTU7 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
SCXQ7RTU7 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC9.88□□□□□ -0.83
SCXQ7RTU7 USE1-206ENST00000595101 1776 ntTSL 2 BASIC9.88□□□□□ -0.83
SCXQ7RTU7 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SCXQ7RTU7 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SCXQ7RTU7 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC9.88□□□□□ -0.83
SCXQ7RTU7 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
SCXQ7RTU7 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SCXQ7RTU7 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC9.88□□□□□ -0.83
SCXQ7RTU7 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC9.88□□□□□ -0.83
SCXQ7RTU7 MSTO2P-201ENST00000314835 1709 ntBASIC9.87□□□□□ -0.83
SCXQ7RTU7 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SCXQ7RTU7 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SCXQ7RTU7 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SCXQ7RTU7 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SCXQ7RTU7 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SCXQ7RTU7 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC9.87□□□□□ -0.83
SCXQ7RTU7 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SCXQ7RTU7 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SCXQ7RTU7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC9.87□□□□□ -0.83
SCXQ7RTU7 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SCXQ7RTU7 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
SCXQ7RTU7 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC9.87□□□□□ -0.83
SCXQ7RTU7 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SCXQ7RTU7 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
SCXQ7RTU7 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SCXQ7RTU7 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SCXQ7RTU7 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
SCXQ7RTU7 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SCXQ7RTU7 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SCXQ7RTU7 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SCXQ7RTU7 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SCXQ7RTU7 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SCXQ7RTU7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SCXQ7RTU7 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
SCXQ7RTU7 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SCXQ7RTU7 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SCXQ7RTU7 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SCXQ7RTU7 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SCXQ7RTU7 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC9.87□□□□□ -0.83
SCXQ7RTU7 APOC3-202ENST00000375345 604 ntTSL 5 BASIC9.87□□□□□ -0.83
SCXQ7RTU7 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms