Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
REEP3Q6NUK4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.76□□□□□ -0.21
REEP3Q6NUK4 PMS2P2-201ENST00000425039 1128 ntBASIC13.76□□□□□ -0.21
REEP3Q6NUK4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
REEP3Q6NUK4 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.76□□□□□ -0.21
REEP3Q6NUK4 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.76□□□□□ -0.21
REEP3Q6NUK4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.76□□□□□ -0.21
REEP3Q6NUK4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.76□□□□□ -0.21
REEP3Q6NUK4 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.76□□□□□ -0.21
REEP3Q6NUK4 BX088702.1-201ENST00000610784 235 ntBASIC13.76□□□□□ -0.21
REEP3Q6NUK4 AC006538.3-201ENST00000612495 578 ntBASIC13.76□□□□□ -0.21
REEP3Q6NUK4 AJ011932.1-201ENST00000621707 465 ntBASIC13.76□□□□□ -0.21
REEP3Q6NUK4 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
REEP3Q6NUK4 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
REEP3Q6NUK4 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
REEP3Q6NUK4 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
REEP3Q6NUK4 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
REEP3Q6NUK4 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
REEP3Q6NUK4 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
REEP3Q6NUK4 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
REEP3Q6NUK4 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
REEP3Q6NUK4 HSPA8P5-201ENST00000456928 2069 ntBASIC13.76□□□□□ -0.21
REEP3Q6NUK4 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
REEP3Q6NUK4 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
REEP3Q6NUK4 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
REEP3Q6NUK4 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
REEP3Q6NUK4 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
REEP3Q6NUK4 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
REEP3Q6NUK4 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
REEP3Q6NUK4 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 FAM207CP-201ENST00000443486 507 ntBASIC13.75□□□□□ -0.21
REEP3Q6NUK4 TSPY16P-201ENST00000449843 468 ntBASIC13.75□□□□□ -0.21
REEP3Q6NUK4 TMEM198B-204ENST00000484016 896 ntBASIC13.75□□□□□ -0.21
REEP3Q6NUK4 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 CTBP2P3-201ENST00000585629 1255 ntBASIC13.75□□□□□ -0.21
REEP3Q6NUK4 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
REEP3Q6NUK4 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
REEP3Q6NUK4 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
REEP3Q6NUK4 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
REEP3Q6NUK4 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
REEP3Q6NUK4 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.74□□□□□ -0.21
REEP3Q6NUK4 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
REEP3Q6NUK4 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
REEP3Q6NUK4 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
REEP3Q6NUK4 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
REEP3Q6NUK4 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms