Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 AL590556.2-202ENST00000636906 844 ntBASIC14.01□□□□□ -0.17
RIF1Q5UIP0 ESR1-214ENST00000638569 132 ntTSL 5 BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 LINC00554-201ENST00000564841 3011 ntBASIC14.01□□□□□ -0.17
RIF1Q5UIP0 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 RN7SL69P-201ENST00000468423 272 ntBASIC14.01□□□□□ -0.17
RIF1Q5UIP0 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 AC004923.3-201ENST00000527532 355 ntBASIC14.01□□□□□ -0.17
RIF1Q5UIP0 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 AL591424.3-201ENST00000614278 872 ntBASIC14.01□□□□□ -0.17
RIF1Q5UIP0 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
RIF1Q5UIP0 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14□□□□□ -0.17
RIF1Q5UIP0 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RIF1Q5UIP0 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
RIF1Q5UIP0 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
RIF1Q5UIP0 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
RIF1Q5UIP0 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
RIF1Q5UIP0 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC14□□□□□ -0.17
RIF1Q5UIP0 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14□□□□□ -0.17
RIF1Q5UIP0 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RIF1Q5UIP0 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RIF1Q5UIP0 SIRPB3P-201ENST00000340424 1216 ntBASIC14□□□□□ -0.17
RIF1Q5UIP0 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC14□□□□□ -0.17
RIF1Q5UIP0 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC14□□□□□ -0.17
RIF1Q5UIP0 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC14□□□□□ -0.17
RIF1Q5UIP0 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC14□□□□□ -0.17
RIF1Q5UIP0 RN7SL524P-201ENST00000581152 300 ntBASIC14□□□□□ -0.17
RIF1Q5UIP0 AC005746.2-201ENST00000585765 470 ntTSL 5 BASIC14□□□□□ -0.17
RIF1Q5UIP0 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC14□□□□□ -0.17
RIF1Q5UIP0 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC14□□□□□ -0.17
RIF1Q5UIP0 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC14□□□□□ -0.17
RIF1Q5UIP0 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RIF1Q5UIP0 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14□□□□□ -0.17
RIF1Q5UIP0 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RIF1Q5UIP0 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14□□□□□ -0.17
RIF1Q5UIP0 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14□□□□□ -0.17
RIF1Q5UIP0 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RIF1Q5UIP0 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RIF1Q5UIP0 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14□□□□□ -0.17
RIF1Q5UIP0 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RIF1Q5UIP0 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RIF1Q5UIP0 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
RIF1Q5UIP0 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14□□□□□ -0.17
RIF1Q5UIP0 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RIF1Q5UIP0 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RIF1Q5UIP0 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14□□□□□ -0.17
RIF1Q5UIP0 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC14□□□□□ -0.17
RIF1Q5UIP0 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14□□□□□ -0.17
RIF1Q5UIP0 AC025594.1-201ENST00000469533 543 ntBASIC14□□□□□ -0.17
RIF1Q5UIP0 ABCC6P2-201ENST00000526069 590 ntBASIC14□□□□□ -0.17
RIF1Q5UIP0 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
RIF1Q5UIP0 CLPP-205ENST00000596605 646 ntTSL 2 BASIC14□□□□□ -0.17
RIF1Q5UIP0 AL136982.5-201ENST00000605222 294 ntBASIC14□□□□□ -0.17
RIF1Q5UIP0 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RIF1Q5UIP0 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RIF1Q5UIP0 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
RIF1Q5UIP0 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RIF1Q5UIP0 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RIF1Q5UIP0 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14□□□□□ -0.17
RIF1Q5UIP0 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RIF1Q5UIP0 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC13.99□□□□□ -0.17
RIF1Q5UIP0 AC011270.2-201ENST00000624293 2550 ntBASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms