Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
VARS2Q5ST30 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VARS2Q5ST30 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VARS2Q5ST30 AC023157.3-201ENST00000619086 2088 ntBASIC15.61■□□□□ 0.09
VARS2Q5ST30 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
VARS2Q5ST30 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
VARS2Q5ST30 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VARS2Q5ST30 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
VARS2Q5ST30 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VARS2Q5ST30 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VARS2Q5ST30 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.61■□□□□ 0.09
VARS2Q5ST30 KRT8P21-201ENST00000430398 1491 ntBASIC15.61■□□□□ 0.09
VARS2Q5ST30 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VARS2Q5ST30 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
VARS2Q5ST30 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
VARS2Q5ST30 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VARS2Q5ST30 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VARS2Q5ST30 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
VARS2Q5ST30 MPV17-204ENST00000399052 749 ntTSL 4 BASIC15.61■□□□□ 0.09
VARS2Q5ST30 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
VARS2Q5ST30 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
VARS2Q5ST30 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC15.61■□□□□ 0.09
VARS2Q5ST30 CENPX-208ENST00000584347 799 ntTSL 2 BASIC15.61■□□□□ 0.09
VARS2Q5ST30 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.61■□□□□ 0.09
VARS2Q5ST30 AL133499.1-201ENST00000596207 608 ntBASIC15.61■□□□□ 0.09
VARS2Q5ST30 AL353770.1-201ENST00000614915 403 ntBASIC15.61■□□□□ 0.09
VARS2Q5ST30 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
VARS2Q5ST30 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
VARS2Q5ST30 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.61■□□□□ 0.09
VARS2Q5ST30 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
VARS2Q5ST30 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
VARS2Q5ST30 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
VARS2Q5ST30 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
VARS2Q5ST30 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VARS2Q5ST30 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
VARS2Q5ST30 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
VARS2Q5ST30 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VARS2Q5ST30 DBET-201ENST00000630918 3363 ntBASIC15.61■□□□□ 0.09
VARS2Q5ST30 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VARS2Q5ST30 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VARS2Q5ST30 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VARS2Q5ST30 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VARS2Q5ST30 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.6■□□□□ 0.09
VARS2Q5ST30 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
VARS2Q5ST30 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VARS2Q5ST30 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
VARS2Q5ST30 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
VARS2Q5ST30 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.6■□□□□ 0.09
VARS2Q5ST30 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
VARS2Q5ST30 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.6■□□□□ 0.09
VARS2Q5ST30 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VARS2Q5ST30 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
VARS2Q5ST30 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
VARS2Q5ST30 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.6■□□□□ 0.09
VARS2Q5ST30 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VARS2Q5ST30 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
VARS2Q5ST30 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VARS2Q5ST30 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VARS2Q5ST30 AC239868.1-201ENST00000369385 493 ntBASIC15.6■□□□□ 0.09
VARS2Q5ST30 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
VARS2Q5ST30 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.6■□□□□ 0.09
VARS2Q5ST30 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC15.6■□□□□ 0.09
VARS2Q5ST30 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VARS2Q5ST30 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC15.6■□□□□ 0.09
VARS2Q5ST30 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC15.6■□□□□ 0.09
VARS2Q5ST30 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC15.6■□□□□ 0.09
VARS2Q5ST30 AC073150.1-201ENST00000450406 1084 ntBASIC15.6■□□□□ 0.09
VARS2Q5ST30 AL353637.1-201ENST00000451571 732 ntBASIC15.6■□□□□ 0.09
VARS2Q5ST30 AC008267.1-201ENST00000474858 1069 ntBASIC15.6■□□□□ 0.09
VARS2Q5ST30 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.6■□□□□ 0.09
VARS2Q5ST30 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC15.6■□□□□ 0.09
VARS2Q5ST30 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC15.6■□□□□ 0.09
VARS2Q5ST30 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC15.6■□□□□ 0.09
VARS2Q5ST30 AC016597.2-201ENST00000613256 341 ntBASIC15.6■□□□□ 0.09
VARS2Q5ST30 UCHL3-206ENST00000618773 1050 ntTSL 5 BASIC15.6■□□□□ 0.09
VARS2Q5ST30 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC15.6■□□□□ 0.09
VARS2Q5ST30 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.6■□□□□ 0.09
VARS2Q5ST30 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.6■□□□□ 0.09
VARS2Q5ST30 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
VARS2Q5ST30 AC139712.1-201ENST00000378256 1875 ntBASIC15.6■□□□□ 0.09
VARS2Q5ST30 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
VARS2Q5ST30 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
VARS2Q5ST30 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VARS2Q5ST30 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VARS2Q5ST30 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
VARS2Q5ST30 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
VARS2Q5ST30 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.6■□□□□ 0.09
VARS2Q5ST30 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VARS2Q5ST30 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VARS2Q5ST30 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
VARS2Q5ST30 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
VARS2Q5ST30 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
VARS2Q5ST30 AC009093.10-201ENST00000641956 1442 ntBASIC15.6■□□□□ 0.09
VARS2Q5ST30 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
VARS2Q5ST30 TCAF2P1-201ENST00000291129 2421 ntBASIC15.59■□□□□ 0.09
VARS2Q5ST30 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VARS2Q5ST30 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
VARS2Q5ST30 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
VARS2Q5ST30 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
VARS2Q5ST30 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms