Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 EIF3FP3-201ENST00000434851 1086 ntBASIC9.81□□□□□ -0.84
SYCNQ0VAF6 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 AC093433.1-201ENST00000458048 571 ntBASIC9.81□□□□□ -0.84
SYCNQ0VAF6 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 AC022137.2-201ENST00000503482 481 ntBASIC9.81□□□□□ -0.84
SYCNQ0VAF6 PTP4A1P2-201ENST00000546033 454 ntBASIC9.81□□□□□ -0.84
SYCNQ0VAF6 AC190387.1-201ENST00000551683 408 ntBASIC9.81□□□□□ -0.84
SYCNQ0VAF6 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 YTHDF3-AS1-201ENST00000603538 718 ntBASIC9.81□□□□□ -0.84
SYCNQ0VAF6 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 AC015802.1-201ENST00000588104 1449 ntBASIC9.81□□□□□ -0.84
SYCNQ0VAF6 AL354702.1-201ENST00000442006 1960 ntBASIC9.81□□□□□ -0.84
SYCNQ0VAF6 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC9.81□□□□□ -0.84
SYCNQ0VAF6 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 TP73-211ENST00000604074 4806 ntTSL 5 BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 PTENP1-202ENST00000532280 3996 ntBASIC9.8□□□□□ -0.84
SYCNQ0VAF6 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 AL136172.1-201ENST00000598590 1394 ntBASIC9.8□□□□□ -0.84
SYCNQ0VAF6 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 FO681548.1-201ENST00000455617 1132 ntBASIC9.8□□□□□ -0.84
SYCNQ0VAF6 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 NEU3-203ENST00000529024 581 ntTSL 3 BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
SYCNQ0VAF6 TP53TG3HP-202ENST00000569755 579 ntBASIC9.8□□□□□ -0.84
SYCNQ0VAF6 CLUHP6-201ENST00000580789 941 ntBASIC9.8□□□□□ -0.84
SYCNQ0VAF6 AC027307.3-201ENST00000594262 1100 ntBASIC9.8□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms