Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.22□□□□□ -0.29
SCN1BQ07699 TARDBPP1-201ENST00000442013 1203 ntBASIC13.22□□□□□ -0.29
SCN1BQ07699 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SCN1BQ07699 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.22□□□□□ -0.29
SCN1BQ07699 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SCN1BQ07699 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.22□□□□□ -0.29
SCN1BQ07699 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.22□□□□□ -0.29
SCN1BQ07699 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.22□□□□□ -0.29
SCN1BQ07699 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
SCN1BQ07699 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.22□□□□□ -0.29
SCN1BQ07699 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SCN1BQ07699 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SCN1BQ07699 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SCN1BQ07699 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.22□□□□□ -0.29
SCN1BQ07699 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SCN1BQ07699 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
SCN1BQ07699 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SCN1BQ07699 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SCN1BQ07699 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.22□□□□□ -0.29
SCN1BQ07699 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
SCN1BQ07699 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SCN1BQ07699 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.22□□□□□ -0.29
SCN1BQ07699 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SCN1BQ07699 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.22□□□□□ -0.29
SCN1BQ07699 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SCN1BQ07699 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SCN1BQ07699 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SCN1BQ07699 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SCN1BQ07699 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.22□□□□□ -0.29
SCN1BQ07699 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SCN1BQ07699 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SCN1BQ07699 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SCN1BQ07699 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SCN1BQ07699 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SCN1BQ07699 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SCN1BQ07699 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.22□□□□□ -0.29
SCN1BQ07699 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
SCN1BQ07699 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
SCN1BQ07699 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SCN1BQ07699 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SCN1BQ07699 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SCN1BQ07699 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.21□□□□□ -0.29
SCN1BQ07699 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SCN1BQ07699 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.21□□□□□ -0.29
SCN1BQ07699 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SCN1BQ07699 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SCN1BQ07699 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
SCN1BQ07699 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SCN1BQ07699 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SCN1BQ07699 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.21□□□□□ -0.29
SCN1BQ07699 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SCN1BQ07699 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.21□□□□□ -0.29
SCN1BQ07699 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
SCN1BQ07699 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SCN1BQ07699 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SCN1BQ07699 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.21□□□□□ -0.29
SCN1BQ07699 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
SCN1BQ07699 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.21□□□□□ -0.29
SCN1BQ07699 SPDYE17-201ENST00000412399 783 ntBASIC13.21□□□□□ -0.29
SCN1BQ07699 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.21□□□□□ -0.29
SCN1BQ07699 HIST3H2BA-201ENST00000436555 524 ntBASIC13.21□□□□□ -0.29
SCN1BQ07699 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.21□□□□□ -0.29
SCN1BQ07699 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.21□□□□□ -0.29
SCN1BQ07699 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.21□□□□□ -0.29
SCN1BQ07699 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SCN1BQ07699 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SCN1BQ07699 AC004967.1-201ENST00000453589 447 ntBASIC13.21□□□□□ -0.29
SCN1BQ07699 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.21□□□□□ -0.29
SCN1BQ07699 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.21□□□□□ -0.29
SCN1BQ07699 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.21□□□□□ -0.29
SCN1BQ07699 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.21□□□□□ -0.29
SCN1BQ07699 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.21□□□□□ -0.29
SCN1BQ07699 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SCN1BQ07699 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.21□□□□□ -0.29
SCN1BQ07699 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SCN1BQ07699 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
SCN1BQ07699 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
SCN1BQ07699 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SCN1BQ07699 PCDHB18P-202ENST00000526308 3197 ntBASIC13.21□□□□□ -0.3
SCN1BQ07699 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.21□□□□□ -0.3
SCN1BQ07699 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.21□□□□□ -0.3
SCN1BQ07699 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC13.21□□□□□ -0.3
SCN1BQ07699 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SCN1BQ07699 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SCN1BQ07699 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
SCN1BQ07699 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SCN1BQ07699 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SCN1BQ07699 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
SCN1BQ07699 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SCN1BQ07699 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SCN1BQ07699 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SCN1BQ07699 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SCN1BQ07699 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SCN1BQ07699 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SCN1BQ07699 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.2□□□□□ -0.3
SCN1BQ07699 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.2□□□□□ -0.3
SCN1BQ07699 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SCN1BQ07699 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SCN1BQ07699 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SCN1BQ07699 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms