Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-1P78426 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-1P78426 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-1P78426 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.09□□□□□ -0.31
NKX6-1P78426 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.09□□□□□ -0.31
NKX6-1P78426 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-1P78426 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.09□□□□□ -0.31
NKX6-1P78426 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
NKX6-1P78426 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
NKX6-1P78426 AC106881.1-201ENST00000605849 3329 ntBASIC13.09□□□□□ -0.31
NKX6-1P78426 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-1P78426 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-1P78426 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.09□□□□□ -0.31
NKX6-1P78426 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.09□□□□□ -0.31
NKX6-1P78426 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.09□□□□□ -0.31
NKX6-1P78426 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.09□□□□□ -0.31
NKX6-1P78426 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.09□□□□□ -0.31
NKX6-1P78426 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-1P78426 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-1P78426 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.09□□□□□ -0.31
NKX6-1P78426 NDUFV2P1-201ENST00000596415 907 ntBASIC13.09□□□□□ -0.31
NKX6-1P78426 AL096828.3-201ENST00000615354 462 ntBASIC13.09□□□□□ -0.31
NKX6-1P78426 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
NKX6-1P78426 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-1P78426 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.09□□□□□ -0.31
NKX6-1P78426 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
NKX6-1P78426 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.09□□□□□ -0.31
NKX6-1P78426 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.09□□□□□ -0.31
NKX6-1P78426 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.09□□□□□ -0.31
NKX6-1P78426 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-1P78426 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-1P78426 PPT1-215ENST00000641471 2368 ntBASIC13.09□□□□□ -0.31
NKX6-1P78426 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-1P78426 REXO1L5P-201ENST00000622260 2098 ntBASIC13.09□□□□□ -0.31
NKX6-1P78426 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.09□□□□□ -0.31
NKX6-1P78426 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-1P78426 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-1P78426 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-1P78426 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-1P78426 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-1P78426 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-1P78426 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.09□□□□□ -0.31
NKX6-1P78426 AL122018.1-201ENST00000446607 2310 ntBASIC13.08□□□□□ -0.31
NKX6-1P78426 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
NKX6-1P78426 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
NKX6-1P78426 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
NKX6-1P78426 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
NKX6-1P78426 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
NKX6-1P78426 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.08□□□□□ -0.31
NKX6-1P78426 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-1P78426 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-1P78426 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.08□□□□□ -0.32
NKX6-1P78426 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-1P78426 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
NKX6-1P78426 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
NKX6-1P78426 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-1P78426 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.08□□□□□ -0.32
NKX6-1P78426 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-1P78426 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-1P78426 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-1P78426 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-1P78426 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-1P78426 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-1P78426 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
NKX6-1P78426 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
NKX6-1P78426 CD8B2-202ENST00000417670 633 ntBASIC13.08□□□□□ -0.32
NKX6-1P78426 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.08□□□□□ -0.32
NKX6-1P78426 AL590640.2-201ENST00000457038 527 ntBASIC13.08□□□□□ -0.32
NKX6-1P78426 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.08□□□□□ -0.32
NKX6-1P78426 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
NKX6-1P78426 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC13.08□□□□□ -0.32
NKX6-1P78426 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC13.08□□□□□ -0.32
NKX6-1P78426 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.08□□□□□ -0.32
NKX6-1P78426 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.08□□□□□ -0.32
NKX6-1P78426 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.08□□□□□ -0.32
NKX6-1P78426 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.08□□□□□ -0.32
NKX6-1P78426 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
NKX6-1P78426 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-1P78426 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-1P78426 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-1P78426 AL157414.3-201ENST00000624276 1954 ntBASIC13.08□□□□□ -0.32
NKX6-1P78426 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.08□□□□□ -0.32
NKX6-1P78426 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-1P78426 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-1P78426 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-1P78426 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-1P78426 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
NKX6-1P78426 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
NKX6-1P78426 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-1P78426 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.08□□□□□ -0.32
NKX6-1P78426 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-1P78426 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.08□□□□□ -0.32
NKX6-1P78426 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC13.08□□□□□ -0.32
NKX6-1P78426 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
NKX6-1P78426 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.08□□□□□ -0.32
NKX6-1P78426 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-1P78426 AL354989.2-201ENST00000435838 1540 ntBASIC13.08□□□□□ -0.32
NKX6-1P78426 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.08□□□□□ -0.32
NKX6-1P78426 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-1P78426 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms