Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SKP1P63208 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SKP1P63208 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SKP1P63208 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SKP1P63208 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.02□□□□□ -0.17
SKP1P63208 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SKP1P63208 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.02□□□□□ -0.17
SKP1P63208 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SKP1P63208 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SKP1P63208 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SKP1P63208 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SKP1P63208 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SKP1P63208 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SKP1P63208 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SKP1P63208 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.01□□□□□ -0.17
SKP1P63208 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SKP1P63208 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SKP1P63208 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
SKP1P63208 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14.01□□□□□ -0.17
SKP1P63208 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.01□□□□□ -0.17
SKP1P63208 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SKP1P63208 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SKP1P63208 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SKP1P63208 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.01□□□□□ -0.17
SKP1P63208 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SKP1P63208 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.01□□□□□ -0.17
SKP1P63208 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
SKP1P63208 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
SKP1P63208 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.01□□□□□ -0.17
SKP1P63208 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SKP1P63208 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SKP1P63208 AC009093.10-201ENST00000641956 1442 ntBASIC14.01□□□□□ -0.17
SKP1P63208 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
SKP1P63208 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SKP1P63208 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SKP1P63208 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.01□□□□□ -0.17
SKP1P63208 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
SKP1P63208 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SKP1P63208 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SKP1P63208 MIR326-201ENST00000362220 95 ntBASIC14.01□□□□□ -0.17
SKP1P63208 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.01□□□□□ -0.17
SKP1P63208 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SKP1P63208 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.01□□□□□ -0.17
SKP1P63208 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.01□□□□□ -0.17
SKP1P63208 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.01□□□□□ -0.17
SKP1P63208 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.01□□□□□ -0.17
SKP1P63208 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SKP1P63208 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
SKP1P63208 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.01□□□□□ -0.17
SKP1P63208 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SKP1P63208 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.01□□□□□ -0.17
SKP1P63208 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.01□□□□□ -0.17
SKP1P63208 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SKP1P63208 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.01□□□□□ -0.17
SKP1P63208 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.01□□□□□ -0.17
SKP1P63208 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SKP1P63208 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.01□□□□□ -0.17
SKP1P63208 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.01□□□□□ -0.17
SKP1P63208 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SKP1P63208 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.01□□□□□ -0.17
SKP1P63208 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
SKP1P63208 DUX4L46-201ENST00000566845 751 ntBASIC14.01□□□□□ -0.17
SKP1P63208 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.01□□□□□ -0.17
SKP1P63208 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.01□□□□□ -0.17
SKP1P63208 AL023803.2-201ENST00000620080 638 ntBASIC14.01□□□□□ -0.17
SKP1P63208 AC009093.2-202ENST00000620513 2079 ntBASIC14.01□□□□□ -0.17
SKP1P63208 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.01□□□□□ -0.17
SKP1P63208 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SKP1P63208 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SKP1P63208 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.01□□□□□ -0.17
SKP1P63208 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SKP1P63208 CICP14-201ENST00000629111 2732 ntBASIC14.01□□□□□ -0.17
SKP1P63208 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.01□□□□□ -0.17
SKP1P63208 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
SKP1P63208 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SKP1P63208 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SKP1P63208 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.01□□□□□ -0.17
SKP1P63208 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
SKP1P63208 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SKP1P63208 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SKP1P63208 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14□□□□□ -0.17
SKP1P63208 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14□□□□□ -0.17
SKP1P63208 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SKP1P63208 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
SKP1P63208 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14□□□□□ -0.17
SKP1P63208 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SKP1P63208 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SKP1P63208 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SKP1P63208 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SKP1P63208 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SKP1P63208 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SKP1P63208 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14□□□□□ -0.17
SKP1P63208 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SKP1P63208 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14□□□□□ -0.17
SKP1P63208 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SKP1P63208 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14□□□□□ -0.17
SKP1P63208 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14□□□□□ -0.17
SKP1P63208 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SKP1P63208 AL354877.1-201ENST00000424412 413 ntBASIC14□□□□□ -0.17
SKP1P63208 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms