Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC42P60953 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC42P60953 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDC42P60953 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC42P60953 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDC42P60953 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.53□□□□□ -0.24
CDC42P60953 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC42P60953 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC42P60953 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
CDC42P60953 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDC42P60953 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC42P60953 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.53□□□□□ -0.24
CDC42P60953 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDC42P60953 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
CDC42P60953 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.53□□□□□ -0.24
CDC42P60953 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.53□□□□□ -0.24
CDC42P60953 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.53□□□□□ -0.24
CDC42P60953 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDC42P60953 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.53□□□□□ -0.24
CDC42P60953 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.53□□□□□ -0.24
CDC42P60953 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.53□□□□□ -0.24
CDC42P60953 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.53□□□□□ -0.24
CDC42P60953 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.53□□□□□ -0.24
CDC42P60953 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.53□□□□□ -0.24
CDC42P60953 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.53□□□□□ -0.24
CDC42P60953 TEX28P1-201ENST00000613479 1221 ntBASIC13.53□□□□□ -0.24
CDC42P60953 TEX28P2-201ENST00000617764 1221 ntBASIC13.53□□□□□ -0.24
CDC42P60953 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC42P60953 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDC42P60953 KRT8P35-201ENST00000483942 1338 ntBASIC13.53□□□□□ -0.24
CDC42P60953 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CDC42P60953 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.53□□□□□ -0.24
CDC42P60953 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC42P60953 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC42P60953 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.53□□□□□ -0.24
CDC42P60953 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CDC42P60953 AL136172.1-201ENST00000598590 1394 ntBASIC13.53□□□□□ -0.24
CDC42P60953 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.53□□□□□ -0.24
CDC42P60953 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC42P60953 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CDC42P60953 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC42P60953 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.53□□□□□ -0.24
CDC42P60953 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.53□□□□□ -0.24
CDC42P60953 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDC42P60953 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
CDC42P60953 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC42P60953 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CDC42P60953 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC42P60953 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC42P60953 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CDC42P60953 HSPA8P5-201ENST00000456928 2069 ntBASIC13.52□□□□□ -0.24
CDC42P60953 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CDC42P60953 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CDC42P60953 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
CDC42P60953 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CDC42P60953 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CDC42P60953 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CDC42P60953 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.52□□□□□ -0.25
CDC42P60953 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.52□□□□□ -0.25
CDC42P60953 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.52□□□□□ -0.25
CDC42P60953 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CDC42P60953 AC023141.5-201ENST00000458585 616 ntBASIC13.52□□□□□ -0.25
CDC42P60953 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.52□□□□□ -0.25
CDC42P60953 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.52□□□□□ -0.25
CDC42P60953 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.52□□□□□ -0.25
CDC42P60953 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
CDC42P60953 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.52□□□□□ -0.25
CDC42P60953 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.52□□□□□ -0.25
CDC42P60953 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.52□□□□□ -0.25
CDC42P60953 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CDC42P60953 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.52□□□□□ -0.25
CDC42P60953 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CDC42P60953 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CDC42P60953 AL138799.1-201ENST00000448213 1675 ntBASIC13.52□□□□□ -0.25
CDC42P60953 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CDC42P60953 SALL4P5-201ENST00000419001 1760 ntBASIC13.52□□□□□ -0.25
CDC42P60953 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CDC42P60953 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
CDC42P60953 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.52□□□□□ -0.25
CDC42P60953 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CDC42P60953 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CDC42P60953 AL356585.2-201ENST00000625078 2396 ntBASIC13.52□□□□□ -0.25
CDC42P60953 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CDC42P60953 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.52□□□□□ -0.25
CDC42P60953 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CDC42P60953 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.52□□□□□ -0.25
CDC42P60953 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CDC42P60953 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
CDC42P60953 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
CDC42P60953 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC42P60953 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC42P60953 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CDC42P60953 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC42P60953 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.51□□□□□ -0.25
CDC42P60953 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.51□□□□□ -0.25
CDC42P60953 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CDC42P60953 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.51□□□□□ -0.25
CDC42P60953 AC011498.7-201ENST00000624986 2027 ntBASIC13.51□□□□□ -0.25
CDC42P60953 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
CDC42P60953 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms