Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK4P57078 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK4P57078 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RIPK4P57078 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC19.19■□□□□ 0.66
RIPK4P57078 AC022217.1-201ENST00000521069 738 ntBASIC19.19■□□□□ 0.66
RIPK4P57078 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC19.19■□□□□ 0.66
RIPK4P57078 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC19.19■□□□□ 0.66
RIPK4P57078 AC103810.3-201ENST00000583567 96 ntBASIC19.19■□□□□ 0.66
RIPK4P57078 AC138649.2-201ENST00000615886 705 ntBASIC19.19■□□□□ 0.66
RIPK4P57078 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC19.19■□□□□ 0.66
RIPK4P57078 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK4P57078 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK4P57078 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK4P57078 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RIPK4P57078 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK4P57078 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK4P57078 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RIPK4P57078 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC19.19■□□□□ 0.66
RIPK4P57078 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK4P57078 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK4P57078 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK4P57078 PCDHA3-202ENST00000532566 4594 ntBASIC19.18■□□□□ 0.66
RIPK4P57078 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC19.18■□□□□ 0.66
RIPK4P57078 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RIPK4P57078 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RIPK4P57078 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RIPK4P57078 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
RIPK4P57078 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RIPK4P57078 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC19.18■□□□□ 0.66
RIPK4P57078 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RIPK4P57078 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RIPK4P57078 AC104581.4-201ENST00000623126 3052 ntBASIC19.18■□□□□ 0.66
RIPK4P57078 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
RIPK4P57078 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RIPK4P57078 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RIPK4P57078 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RIPK4P57078 SDCCAG3P2-201ENST00000326105 1023 ntBASIC19.18■□□□□ 0.66
RIPK4P57078 CRCP-204ENST00000398684 492 ntTSL 2 BASIC19.18■□□□□ 0.66
RIPK4P57078 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC19.18■□□□□ 0.66
RIPK4P57078 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC19.18■□□□□ 0.66
RIPK4P57078 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC19.18■□□□□ 0.66
RIPK4P57078 MARK2P5-201ENST00000507649 634 ntBASIC19.18■□□□□ 0.66
RIPK4P57078 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC19.18■□□□□ 0.66
RIPK4P57078 SCARNA20.5-201ENST00000516991 142 ntBASIC19.18■□□□□ 0.66
RIPK4P57078 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC19.18■□□□□ 0.66
RIPK4P57078 SORD2P-201ENST00000558556 1069 ntBASIC19.18■□□□□ 0.66
RIPK4P57078 AC027237.1-201ENST00000560942 655 ntBASIC19.18■□□□□ 0.66
RIPK4P57078 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC19.18■□□□□ 0.66
RIPK4P57078 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC19.18■□□□□ 0.66
RIPK4P57078 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RIPK4P57078 AL645939.5-201ENST00000606834 243 ntBASIC19.18■□□□□ 0.66
RIPK4P57078 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC19.18■□□□□ 0.66
RIPK4P57078 AL136295.7-201ENST00000619226 1200 ntBASIC19.18■□□□□ 0.66
RIPK4P57078 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RIPK4P57078 DDX5-235ENST00000630471 473 ntTSL 4 BASIC19.18■□□□□ 0.66
RIPK4P57078 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
RIPK4P57078 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RIPK4P57078 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC19.18■□□□□ 0.66
RIPK4P57078 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RIPK4P57078 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RIPK4P57078 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RIPK4P57078 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RIPK4P57078 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RIPK4P57078 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
RIPK4P57078 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RIPK4P57078 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RIPK4P57078 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RIPK4P57078 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RIPK4P57078 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
RIPK4P57078 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC19.17■□□□□ 0.66
RIPK4P57078 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RIPK4P57078 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC19.17■□□□□ 0.66
RIPK4P57078 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC19.17■□□□□ 0.66
RIPK4P57078 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC19.17■□□□□ 0.66
RIPK4P57078 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RIPK4P57078 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RIPK4P57078 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RIPK4P57078 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC19.17■□□□□ 0.66
RIPK4P57078 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RIPK4P57078 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC19.17■□□□□ 0.66
RIPK4P57078 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
RIPK4P57078 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RIPK4P57078 GAS5-209ENST00000430245 723 ntTSL 3 BASIC19.17■□□□□ 0.66
RIPK4P57078 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC19.17■□□□□ 0.66
RIPK4P57078 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RIPK4P57078 FADS2-212ENST00000522639 360 ntTSL 5 BASIC19.17■□□□□ 0.66
RIPK4P57078 AC009779.1-201ENST00000551138 283 ntBASIC19.17■□□□□ 0.66
RIPK4P57078 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC19.17■□□□□ 0.66
RIPK4P57078 FADS2-215ENST00000574708 385 ntTSL 3 BASIC19.17■□□□□ 0.66
RIPK4P57078 AC133540.1-201ENST00000620845 1019 ntBASIC19.17■□□□□ 0.66
RIPK4P57078 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC19.17■□□□□ 0.66
RIPK4P57078 GSN-209ENST00000449733 2702 ntTSL 2 BASIC19.17■□□□□ 0.66
RIPK4P57078 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC19.17■□□□□ 0.66
RIPK4P57078 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RIPK4P57078 TUBBP5-203ENST00000508529 1334 ntBASIC19.17■□□□□ 0.66
RIPK4P57078 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC19.17■□□□□ 0.66
RIPK4P57078 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RIPK4P57078 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RIPK4P57078 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RIPK4P57078 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms