Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDH12P55289 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.8□□□□□ -0.2
CDH12P55289 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.8□□□□□ -0.2
CDH12P55289 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.8□□□□□ -0.2
CDH12P55289 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.8□□□□□ -0.2
CDH12P55289 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.8□□□□□ -0.2
CDH12P55289 SPDYE22P-201ENST00000582158 798 ntBASIC13.8□□□□□ -0.2
CDH12P55289 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.8□□□□□ -0.2
CDH12P55289 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH12P55289 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.8□□□□□ -0.2
CDH12P55289 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH12P55289 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDH12P55289 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH12P55289 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH12P55289 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH12P55289 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CDH12P55289 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CDH12P55289 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CDH12P55289 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
CDH12P55289 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH12P55289 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH12P55289 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.8□□□□□ -0.2
CDH12P55289 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.8□□□□□ -0.2
CDH12P55289 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH12P55289 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDH12P55289 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.79□□□□□ -0.2
CDH12P55289 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH12P55289 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.79□□□□□ -0.2
CDH12P55289 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH12P55289 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.79□□□□□ -0.2
CDH12P55289 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.79□□□□□ -0.2
CDH12P55289 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.79□□□□□ -0.2
CDH12P55289 RN7SL832P-201ENST00000607781 1756 ntBASIC13.79□□□□□ -0.2
CDH12P55289 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH12P55289 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.79□□□□□ -0.2
CDH12P55289 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH12P55289 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.79□□□□□ -0.2
CDH12P55289 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDH12P55289 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH12P55289 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CDH12P55289 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.79□□□□□ -0.2
CDH12P55289 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.79□□□□□ -0.2
CDH12P55289 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CDH12P55289 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH12P55289 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH12P55289 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH12P55289 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH12P55289 AL139094.1-201ENST00000405549 1188 ntBASIC13.79□□□□□ -0.2
CDH12P55289 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.79□□□□□ -0.2
CDH12P55289 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH12P55289 CYMP-203ENST00000474680 1263 ntBASIC13.79□□□□□ -0.2
CDH12P55289 AP001582.1-201ENST00000525856 295 ntBASIC13.79□□□□□ -0.2
CDH12P55289 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.79□□□□□ -0.2
CDH12P55289 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.79□□□□□ -0.2
CDH12P55289 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.79□□□□□ -0.2
CDH12P55289 AC093726.1-201ENST00000608064 963 ntBASIC13.79□□□□□ -0.2
CDH12P55289 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.79□□□□□ -0.2
CDH12P55289 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.79□□□□□ -0.2
CDH12P55289 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.79□□□□□ -0.2
CDH12P55289 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.79□□□□□ -0.2
CDH12P55289 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDH12P55289 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH12P55289 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDH12P55289 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH12P55289 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CDH12P55289 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH12P55289 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.79□□□□□ -0.2
CDH12P55289 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH12P55289 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDH12P55289 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDH12P55289 AC020910.6-201ENST00000623084 1459 ntBASIC13.79□□□□□ -0.2
CDH12P55289 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.79□□□□□ -0.2
CDH12P55289 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH12P55289 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH12P55289 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH12P55289 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH12P55289 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDH12P55289 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CDH12P55289 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.79□□□□□ -0.2
CDH12P55289 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH12P55289 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH12P55289 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH12P55289 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.78□□□□□ -0.2
CDH12P55289 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH12P55289 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.78□□□□□ -0.2
CDH12P55289 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDH12P55289 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH12P55289 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDH12P55289 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH12P55289 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH12P55289 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.78□□□□□ -0.2
CDH12P55289 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.78□□□□□ -0.2
CDH12P55289 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CDH12P55289 SPTLC1P1-201ENST00000447199 261 ntBASIC13.78□□□□□ -0.2
CDH12P55289 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CDH12P55289 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH12P55289 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDH12P55289 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.78□□□□□ -0.2
CDH12P55289 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.78□□□□□ -0.2
CDH12P55289 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms