Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.08□□□□□ -0.16
NR1H2P55055 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
NR1H2P55055 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
NR1H2P55055 AC090505.1-201ENST00000430515 1834 ntBASIC14.08□□□□□ -0.16
NR1H2P55055 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NR1H2P55055 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
NR1H2P55055 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NR1H2P55055 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NR1H2P55055 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.08□□□□□ -0.16
NR1H2P55055 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NR1H2P55055 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
NR1H2P55055 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
NR1H2P55055 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR1H2P55055 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR1H2P55055 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
NR1H2P55055 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR1H2P55055 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
NR1H2P55055 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NR1H2P55055 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR1H2P55055 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.07□□□□□ -0.16
NR1H2P55055 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR1H2P55055 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR1H2P55055 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR1H2P55055 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.07□□□□□ -0.16
NR1H2P55055 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR1H2P55055 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14.07□□□□□ -0.16
NR1H2P55055 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR1H2P55055 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR1H2P55055 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
NR1H2P55055 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NR1H2P55055 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.07□□□□□ -0.16
NR1H2P55055 AC022447.6-201ENST00000515522 438 ntBASIC14.07□□□□□ -0.16
NR1H2P55055 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
NR1H2P55055 BANF1P1-201ENST00000553684 263 ntBASIC14.07□□□□□ -0.16
NR1H2P55055 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.07□□□□□ -0.16
NR1H2P55055 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.07□□□□□ -0.16
NR1H2P55055 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.07□□□□□ -0.16
NR1H2P55055 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR1H2P55055 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR1H2P55055 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR1H2P55055 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR1H2P55055 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
NR1H2P55055 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR1H2P55055 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR1H2P55055 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.07□□□□□ -0.16
NR1H2P55055 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.07□□□□□ -0.16
NR1H2P55055 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR1H2P55055 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NR1H2P55055 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
NR1H2P55055 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR1H2P55055 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.06□□□□□ -0.16
NR1H2P55055 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H2P55055 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H2P55055 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.06□□□□□ -0.16
NR1H2P55055 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC14.06□□□□□ -0.16
NR1H2P55055 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H2P55055 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.06□□□□□ -0.16
NR1H2P55055 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.06□□□□□ -0.16
NR1H2P55055 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H2P55055 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H2P55055 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H2P55055 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H2P55055 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
NR1H2P55055 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC14.06□□□□□ -0.16
NR1H2P55055 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H2P55055 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H2P55055 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H2P55055 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H2P55055 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
NR1H2P55055 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC14.06□□□□□ -0.16
NR1H2P55055 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H2P55055 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.06□□□□□ -0.16
NR1H2P55055 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H2P55055 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.06□□□□□ -0.16
NR1H2P55055 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H2P55055 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.06□□□□□ -0.16
NR1H2P55055 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H2P55055 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.06□□□□□ -0.16
NR1H2P55055 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.06□□□□□ -0.16
NR1H2P55055 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.06□□□□□ -0.16
NR1H2P55055 AL353779.1-201ENST00000434793 351 ntBASIC14.06□□□□□ -0.16
NR1H2P55055 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H2P55055 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.06□□□□□ -0.16
NR1H2P55055 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
NR1H2P55055 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.06□□□□□ -0.16
NR1H2P55055 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
NR1H2P55055 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.06□□□□□ -0.16
NR1H2P55055 AC061975.2-201ENST00000581722 295 ntBASIC14.06□□□□□ -0.16
NR1H2P55055 AL844908.2-201ENST00000609461 460 ntBASIC14.06□□□□□ -0.16
NR1H2P55055 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H2P55055 AC025048.6-201ENST00000634326 1161 ntBASIC14.06□□□□□ -0.16
NR1H2P55055 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
NR1H2P55055 AC073869.1-201ENST00000415574 2762 ntBASIC14.06□□□□□ -0.16
NR1H2P55055 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
NR1H2P55055 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H2P55055 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H2P55055 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H2P55055 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H2P55055 PEG13-201ENST00000631594 5667 ntBASIC14.06□□□□□ -0.16
NR1H2P55055 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms