Protein–RNA interactions for Protein: P55008

AIF1, Allograft inflammatory factor 1, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AIF1P55008 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AIF1P55008 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.12■□□□□ 0.01
AIF1P55008 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
AIF1P55008 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AIF1P55008 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
AIF1P55008 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.12■□□□□ 0.01
AIF1P55008 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AIF1P55008 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AIF1P55008 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
AIF1P55008 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AIF1P55008 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AIF1P55008 GRK6P1-201ENST00000400595 1711 ntBASIC15.12■□□□□ 0.01
AIF1P55008 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.12■□□□□ 0.01
AIF1P55008 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.12■□□□□ 0.01
AIF1P55008 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AIF1P55008 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
AIF1P55008 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
AIF1P55008 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AIF1P55008 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AIF1P55008 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
AIF1P55008 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AIF1P55008 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
AIF1P55008 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AIF1P55008 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.11■□□□□ 0.01
AIF1P55008 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AIF1P55008 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AIF1P55008 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
AIF1P55008 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
AIF1P55008 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AIF1P55008 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
AIF1P55008 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AIF1P55008 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.11■□□□□ 0.01
AIF1P55008 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.11■□□□□ 0.01
AIF1P55008 ST13P19-201ENST00000442505 1124 ntBASIC15.11■□□□□ 0.01
AIF1P55008 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.11■□□□□ 0.01
AIF1P55008 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.11■□□□□ 0.01
AIF1P55008 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.11■□□□□ 0.01
AIF1P55008 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.11■□□□□ 0.01
AIF1P55008 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AIF1P55008 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AIF1P55008 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.11■□□□□ 0.01
AIF1P55008 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
AIF1P55008 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
AIF1P55008 AC005324.6-201ENST00000587972 613 ntBASIC15.11■□□□□ 0.01
AIF1P55008 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.11■□□□□ 0.01
AIF1P55008 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.11■□□□□ 0.01
AIF1P55008 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.11■□□□□ 0.01
AIF1P55008 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AIF1P55008 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AIF1P55008 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AIF1P55008 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AIF1P55008 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.11■□□□□ 0.01
AIF1P55008 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.11■□□□□ 0.01
AIF1P55008 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.11■□□□□ 0.01
AIF1P55008 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AIF1P55008 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.11■□□□□ 0.01
AIF1P55008 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AIF1P55008 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
AIF1P55008 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.11■□□□□ 0.01
AIF1P55008 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AIF1P55008 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
AIF1P55008 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AIF1P55008 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AIF1P55008 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.11■□□□□ 0.01
AIF1P55008 KRT8P29-201ENST00000420409 1371 ntBASIC15.11■□□□□ 0.01
AIF1P55008 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AIF1P55008 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AIF1P55008 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AIF1P55008 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
AIF1P55008 AC027601.5-201ENST00000624065 2482 ntBASIC15.1■□□□□ 0.01
AIF1P55008 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
AIF1P55008 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AIF1P55008 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
AIF1P55008 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AIF1P55008 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AIF1P55008 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AIF1P55008 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
AIF1P55008 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.1■□□□□ 0.01
AIF1P55008 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
AIF1P55008 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AIF1P55008 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
AIF1P55008 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AIF1P55008 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AIF1P55008 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
AIF1P55008 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AIF1P55008 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.1■□□□□ 0.01
AIF1P55008 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.1■□□□□ 0.01
AIF1P55008 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.1■□□□□ 0.01
AIF1P55008 POM121L10P-201ENST00000436994 1285 ntBASIC15.1■□□□□ 0.01
AIF1P55008 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.1■□□□□ 0.01
AIF1P55008 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
AIF1P55008 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.1■□□□□ 0.01
AIF1P55008 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.1■□□□□ 0.01
AIF1P55008 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.1■□□□□ 0.01
AIF1P55008 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.1■□□□□ 0.01
AIF1P55008 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AIF1P55008 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AIF1P55008 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AIF1P55008 AC097376.2-205ENST00000610159 5334 ntBASIC15.1■□□□□ 0.01
AIF1P55008 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms